RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 RAD17O75943 681 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 TTLL1O95922 423 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 VIL1P09327 827 aaKnown RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 C11orf57Q6ZUT1 292 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 BLIDQ8IZY5 108 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 TIGD1Q96MW7 591 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 GMLQ99445 158 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 SDF4Q9BRK5 362 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 PRDM10Q9NQV6 1147 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 KIAA1468Q9P260 1216 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 PI4KBQ9UBF8 816 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 KCNG1Q9UIX4 513 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 PCDHA4Q9UN74 947 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 CEP131Q9UPN4 1083 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 SRPRBQ9Y5M8 271 aaKnown RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 ATAD5Q96QE3 1844 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 MYH7BA7E2Y1 1941 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 CALML3P27482 149 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 SMARCA1P28370 1054 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 ZNF165P49910 485 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 TGFB2P61812 414 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 PIK3AP1Q6ZUJ8 805 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 HEATR3Q7Z4Q2 680 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 CCDC125Q86Z20 511 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 LARGE2Q8N3Y3 721 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
COL12A1-204ENST00000419671 RIOX1Q9H6W3 641 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 RRAGDQ9NQL2 400 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-204ENST00000419671 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 KCNH3Q9ULD8 1083 aa9.3□□□□□ -0.92
COL12A1-204ENST00000419671 FRMPD2Q68DX3 1309 aaPredicted RBP9.3□□□□□ -0.92
COL12A1-204ENST00000419671 ADCY5O95622 1261 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 IQCB1Q15051 598 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 STX1AQ16623 288 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 LONRF3Q496Y0 759 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 TTC38Q5R3I4 469 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 CHADLQ6NUI6 762 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 TATDN1Q6P1N9 297 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 USP49Q70CQ1 688 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 METTL16Q86W50 562 aaKnown RBP9.29□□□□□ -0.92
COL12A1-204ENST00000419671 ZSCAN29Q8IWY8 852 aaPredicted RBP9.29□□□□□ -0.92
COL12A1-204ENST00000419671 DAGLBQ8NCG7 672 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 RASGRP4Q8TDF6 673 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 CCDC17Q96LX7 622 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 UBA5Q9GZZ9 404 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 ZMYND12Q9H0C1 365 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 CSRNP2Q9H175 543 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 VPS33BQ9H267 617 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 PIM2Q9P1W9 311 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 NOL7Q9UMY1 257 aaKnown RBP9.29□□□□□ -0.92
COL12A1-204ENST00000419671 SMCHD1A6NHR9 2005 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 MPHOSPH10O00566 681 aaKnown RBP9.29□□□□□ -0.92
COL12A1-204ENST00000419671 ENTPD3O75355 529 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 CAVIN2O95810 425 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 TRAPPC10P48553 1259 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 ATP2C1P98194 919 aaPredicted RBP9.29□□□□□ -0.92
COL12A1-204ENST00000419671 CACNB1Q02641 598 aaPredicted RBP9.29□□□□□ -0.92
COL12A1-204ENST00000419671 PTGDRQ13258 359 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 ZNF174Q15697 407 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 ASPRV1Q53RT3 343 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 FAM43AQ8N2R8 423 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 PCDHA6Q9UN73 950 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 PCDHA8Q9Y5H6 950 aa9.29□□□□□ -0.92
COL12A1-204ENST00000419671 ZNF543Q08ER8 600 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 DPCR1Q3MIW9 517 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 CERKLQ49MI3 558 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-204ENST00000419671 HS1BP3Q53T59 392 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 SOGA3Q5TF21 947 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 GALNT17Q6IS24 598 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 KRBA2Q6ZNG9 492 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 SIAH1Q8IUQ4 282 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 FOXP4Q8IVH2 680 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-204ENST00000419671 FAM177A1Q8N128 213 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-204ENST00000419671 CCDC148Q8NFR7 591 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
COL12A1-204ENST00000419671 PIGSQ96S52 555 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 VAT1LQ9HCJ6 419 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 ANO10Q9NW15 660 aa9.28□□□□□ -0.92
COL12A1-204ENST00000419671 CNTNAP1P78357 1384 aa9.27□□□□□ -0.92
COL12A1-204ENST00000419671 A0A087X0B3 334 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 ESPNB1AK53 854 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 POLR2DO15514 142 aaKnown RBP9.27□□□□□ -0.93
COL12A1-204ENST00000419671 CLSTN1O94985 981 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 BMP15O95972 392 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 MCM7P33993 719 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 JAG1P78504 1218 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
COL12A1-204ENST00000419671 PNOCQ13519 176 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 RRP1BQ14684 758 aaKnown RBP9.27□□□□□ -0.93
COL12A1-204ENST00000419671 IL17AQ16552 155 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 TTBK2Q6IQ55 1244 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 DHX40Q8IX18 779 aaKnown RBP9.27□□□□□ -0.93
COL12A1-204ENST00000419671 FERMT2Q96AC1 680 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 EPSTI1Q96J88 318 aa9.27□□□□□ -0.93
COL12A1-204ENST00000419671 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms