RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 SKILP12757 684 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PRKCSHP14314 528 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 ZNF18P17022 549 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 LMOD1P29536 600 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PPP1R2P41236 205 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 DPYDQ12882 1025 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 FILIP1Q7Z7B0 1213 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PAGE5Q96GU1 130 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 HSD3B7Q9H2F3 369 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PCDHA6Q9UN73 950 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PCDHA8Q9Y5H6 950 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PSDA5PKW4 1024 aaPredicted RBP16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 MCM7P33993 719 aa16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SPAG1Q07617 926 aa16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 FCHSD1Q86WN1 690 aa16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PDILTQ8N807 584 aa16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 NAP1L4Q99733 375 aaKnown RBP16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
HLA-DPA1-242ENST00000419277 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 UQCRHP07919 91 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 RXRBP28702 533 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CCZ1BP86790 482 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CCZ1P86791 482 aaPredicted RBP16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CFAP100Q494V2 611 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 VSTM4Q8IW00 320 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 REXO1Q8N1G1 1221 aaKnown RBP16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 C4orf32Q8N8J7 132 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 FBXW7Q969H0 707 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 MAP7D2Q96T17 732 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 DISC1Q9NRI5 854 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 NFE2L3Q9Y4A8 694 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 BMP6P22004 513 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 LRMPQ12912 555 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SLC4A8Q2Y0W8 1093 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SPATA1Q5VX52 437 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PDXDC2PQ6P474 469 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
HLA-DPA1-242ENST00000419277 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SYNRGQ9UMZ2 1314 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 A0A087WWV3 80 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CRKP46108 304 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 KCNB1Q14721 858 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 TMC6Q7Z403 805 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 RAB34Q9BZG1 259 aa16.47■□□□□ 0.23
HLA-DPA1-242ENST00000419277 ATRNL1Q5VV63 1379 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SIPA1L1O43166 1804 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SLX4Q8IY92 1834 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 STAT6P42226 847 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 TYW1BQ6NUM6 668 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CDC42EP5Q6NZY7 148 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 USP49Q70CQ1 688 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SLC51AQ86UW1 340 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 ANKRD20A12PQ8NF67 263 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CCDC47Q96A33 483 aaKnown RBP16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 FANCLQ9NW38 375 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
HLA-DPA1-242ENST00000419277 ADAMTSL1Q8N6G6 1762 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SMCO2A6NFE2 343 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 FOXN1O15353 648 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SLC26A4O43511 780 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 OR52Z1P0C646 297 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CDK11BP21127 795 aaKnown RBP16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 UBA7P41226 1012 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ZNF543Q08ER8 600 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PICALMQ13492 652 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 A0A087X0B3 334 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 PNMA6FA0A0J9YX94 578 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 GOLGA6L9A6NEM1 432 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ATP1A3P13637 1013 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SHMT1P34896 483 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 CUL4BQ13620 913 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 TPD52L1Q16890 204 aaPredicted RBP16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SLC35G1Q2M3R5 365 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 DACT2Q5SW24 774 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ZNF658Q5TYW1 1059 aaPredicted RBP16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SPECC1LQ69YQ0 1117 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 MKL1Q969V6 931 aa16.45■□□□□ 0.22
HLA-DPA1-242ENST00000419277 SCN9AQ15858 1988 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 WNT7AO00755 349 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 ADCY7P51828 1080 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 AMPD3Q01432 767 aa16.44■□□□□ 0.22
HLA-DPA1-242ENST00000419277 STIM1Q13586 685 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms