RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 AKNAD1Q5T1N1 836 aa19.47■□□□□ 0.71
LINC00404-201ENST00000418660 MFSD6Q6ZSS7 791 aa19.47■□□□□ 0.71
LINC00404-201ENST00000418660 NECAB2Q7Z6G3 386 aa19.47■□□□□ 0.71
LINC00404-201ENST00000418660 DPF3Q92784 378 aa19.47■□□□□ 0.71
LINC00404-201ENST00000418660 PAWRQ96IZ0 340 aaKnown RBP19.47■□□□□ 0.71
LINC00404-201ENST00000418660 SLC38A10Q9HBR0 1119 aa19.47■□□□□ 0.71
LINC00404-201ENST00000418660 TCP11L1Q9NUJ3 509 aa19.47■□□□□ 0.71
LINC00404-201ENST00000418660 CTDP1Q9Y5B0 961 aaPredicted RBP19.47■□□□□ 0.71
LINC00404-201ENST00000418660 TMEM232C9JQI7 657 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 ZNF213O14771 459 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 FDX1P10109 184 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 MCCP23508 829 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 SLC1A4P43007 532 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 KCTD2Q14681 263 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 LHX8Q68G74 356 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 SNRNP48Q6IEG0 339 aaKnown RBP19.46■□□□□ 0.71
LINC00404-201ENST00000418660 FAM160B2Q86V87 743 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 CHURC1Q8WUH1 139 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 STAG1Q8WVM7 1258 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 DSCC1Q9BVC3 393 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 NBPF3Q9H094 633 aa19.46■□□□□ 0.71
LINC00404-201ENST00000418660 RNF41Q9H4P4 317 aaPredicted RBP19.46■□□□□ 0.71
LINC00404-201ENST00000418660 PLA2G6O60733 806 aa19.45■□□□□ 0.7
LINC00404-201ENST00000418660 STAT2P52630 851 aa19.45■□□□□ 0.7
LINC00404-201ENST00000418660 RCSD1Q6JBY9 416 aa19.45■□□□□ 0.7
LINC00404-201ENST00000418660 TBC1D10CQ8IV04 446 aa19.45■□□□□ 0.7
LINC00404-201ENST00000418660 CPXCR1Q8N123 301 aa19.45■□□□□ 0.7
LINC00404-201ENST00000418660 DIS3LQ8TF46 1054 aaKnown RBP19.45■□□□□ 0.7
LINC00404-201ENST00000418660 MAML3Q96JK9 1138 aa19.45■□□□□ 0.7
LINC00404-201ENST00000418660 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
LINC00404-201ENST00000418660 DIS3Q9Y2L1 958 aaKnown RBP19.45■□□□□ 0.7
LINC00404-201ENST00000418660 MKI67P46013 3256 aaKnown RBP19.44■□□□□ 0.7
LINC00404-201ENST00000418660 TOP1P11387 765 aaKnown RBP19.44■□□□□ 0.7
LINC00404-201ENST00000418660 CNGA1P29973 690 aa19.44■□□□□ 0.7
LINC00404-201ENST00000418660 NT5C2P49902 561 aa19.44■□□□□ 0.7
LINC00404-201ENST00000418660 MNX1P50219 401 aaPredicted RBP19.44■□□□□ 0.7
LINC00404-201ENST00000418660 OAZ1P54368 228 aa19.44■□□□□ 0.7
LINC00404-201ENST00000418660 RAVER2Q9HCJ3 691 aaKnown RBP19.44■□□□□ 0.7
LINC00404-201ENST00000418660 RIPK3Q9Y572 518 aa19.44■□□□□ 0.7
LINC00404-201ENST00000418660 H0YGN5 161 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 MSCO60682 206 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 PGK2P07205 417 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 CYBAP13498 195 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 IKQ13123 557 aaPredicted RBP19.43■□□□□ 0.7
LINC00404-201ENST00000418660 ZNF792Q3KQV3 632 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 KCTD1Q719H9 257 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 TRPV1Q8NER1 839 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 ESR2Q92731 530 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 CHMP4CQ96CF2 233 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 TTC14Q96N46 770 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 TMEM47Q9BQJ4 181 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 DDX20Q9UHI6 824 aaKnown RBP19.43■□□□□ 0.7
LINC00404-201ENST00000418660 CTNNA3Q9UI47 895 aa19.43■□□□□ 0.7
LINC00404-201ENST00000418660 SLC4A3P48751 1232 aa19.42■□□□□ 0.7
LINC00404-201ENST00000418660 DCAF4Q8WV16 495 aa19.42■□□□□ 0.7
LINC00404-201ENST00000418660 C11orf49Q9H6J7 331 aa19.42■□□□□ 0.7
LINC00404-201ENST00000418660 FBXO40Q9UH90 709 aa19.42■□□□□ 0.7
LINC00404-201ENST00000418660 NR2E3Q9Y5X4 410 aa19.42■□□□□ 0.7
LINC00404-201ENST00000418660 IMMTQ16891 758 aaKnown RBP19.41■□□□□ 0.7
LINC00404-201ENST00000418660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.41■□□□□ 0.7
LINC00404-201ENST00000418660 CHST13Q8NET6 341 aa19.41■□□□□ 0.7
LINC00404-201ENST00000418660 RUFY2Q8WXA3 655 aa19.41■□□□□ 0.7
LINC00404-201ENST00000418660 DDX11Q96FC9 970 aa19.41■□□□□ 0.7
LINC00404-201ENST00000418660 IL25Q9H293 177 aa19.41■□□□□ 0.7
LINC00404-201ENST00000418660 MTMR7Q9Y216 660 aa19.41■□□□□ 0.7
LINC00404-201ENST00000418660 NEDD4P46934 1319 aa19.41■□□□□ 0.7
LINC00404-201ENST00000418660 RAD50Q92878 1312 aa19.41■□□□□ 0.7
LINC00404-201ENST00000418660 DNAJC25-GNG10A0A024R161 153 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 EVI5O60447 810 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 CHMLP26374 656 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 CCDC96Q2M329 555 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 PRAMEF19Q5SWL8 479 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 RASGRP2Q7LDG7 609 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 TINF2Q9BSI4 451 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 NRBP1Q9UHY1 535 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 PRR12Q9ULL5 1215 aa19.4■□□□□ 0.7
LINC00404-201ENST00000418660 SEPT4O43236 478 aa19.39■□□□□ 0.69
LINC00404-201ENST00000418660 COL6A1P12109 1028 aa19.39■□□□□ 0.69
LINC00404-201ENST00000418660 MSL3Q8N5Y2 521 aaKnown RBP19.39■□□□□ 0.69
LINC00404-201ENST00000418660 ZNF536O15090 1300 aa19.39■□□□□ 0.69
LINC00404-201ENST00000418660 ZNFX1Q9P2E3 1918 aaKnown RBP19.39■□□□□ 0.69
LINC00404-201ENST00000418660 KDM4AO75164 1064 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 LAMA4Q16363 1823 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 TKFCQ3LXA3 575 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 CCDC178Q5BJE1 867 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 BTNL9Q6UXG8 535 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 IQCA1Q86XH1 822 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 DGKHQ86XP1 1220 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 ANKRD35Q8N283 1001 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 AGBL1Q96MI9 1066 aa19.38■□□□□ 0.69
LINC00404-201ENST00000418660 PFASO15067 1338 aa19.37■□□□□ 0.69
LINC00404-201ENST00000418660 PDHBP11177 359 aa19.37■□□□□ 0.69
LINC00404-201ENST00000418660 TTBK2Q6IQ55 1244 aa19.37■□□□□ 0.69
LINC00404-201ENST00000418660 ZNF467Q7Z7K2 595 aaPredicted RBP19.37■□□□□ 0.69
LINC00404-201ENST00000418660 ZKSCAN3Q9BRR0 538 aa19.37■□□□□ 0.69
LINC00404-201ENST00000418660 KRT23Q9C075 422 aa19.37■□□□□ 0.69
LINC00404-201ENST00000418660 ACAD9Q9H845 621 aa19.37■□□□□ 0.69
LINC00404-201ENST00000418660 B4E1Z4 1266 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 CCDC174Q6PII3 467 aa19.36■□□□□ 0.69
LINC00404-201ENST00000418660 MAMDC4Q6UXC1 1216 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms