RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 F13A1P00488 732 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 GNL2Q13823 731 aaKnown RBP12.35□□□□□ -0.43
NPHP1-205ENST00000418527 PKP1Q13835 747 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 NTRK3Q16288 839 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
NPHP1-205ENST00000418527 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 CLEC10AQ8IUN9 316 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
NPHP1-205ENST00000418527 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 FEZ1Q99689 392 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 PICK1Q9NRD5 415 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
NPHP1-205ENST00000418527 MTMR6Q9Y217 621 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 POLR2AP24928 1970 aaKnown RBP12.35□□□□□ -0.43
NPHP1-205ENST00000418527 MYH6P13533 1939 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
NPHP1-205ENST00000418527 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 USP17L5A8MUK1 530 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 PPP1R12BO60237 982 aaPredicted RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 PDHBP11177 359 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 FDPSP14324 419 aaKnown RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 PTMSP20962 102 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 SMARCA1P28370 1054 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 SLC1A4P43007 532 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 GUCY1B3Q02153 619 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 USP17L2Q6R6M4 530 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 SRBD1Q8N5C6 995 aaKnown RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 RRP36Q96EU6 259 aaKnown RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 WRNIP1Q96S55 665 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 AS3MTQ9HBK9 375 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 BRMS1Q9HCU9 246 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 MAD2L2Q9UI95 211 aa12.34□□□□□ -0.43
NPHP1-205ENST00000418527 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
NPHP1-205ENST00000418527 PHF20L1A8MW92 1017 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 F5H6K3 240 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 GOLGA8HP0CJ92 632 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
NPHP1-205ENST00000418527 KLRC3Q07444 240 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 ZNF543Q08ER8 600 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 TTLL12Q14166 644 aaPredicted RBP12.33□□□□□ -0.44
NPHP1-205ENST00000418527 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
NPHP1-205ENST00000418527 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 PRAMEF18Q5VWM3 479 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 NBPF11Q86T75 865 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 STAG2Q8N3U4 1231 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 PIBF1Q8WXW3 757 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 GPCPD1Q9NPB8 672 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 ZDHHC9Q9Y397 364 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 FRMPD2Q68DX3 1309 aaPredicted RBP12.33□□□□□ -0.44
NPHP1-205ENST00000418527 CNTNAP5Q8WYK1 1306 aa12.33□□□□□ -0.44
NPHP1-205ENST00000418527 WDR90Q96KV7 1748 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 ADM5C9JUS6 153 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 SCG2P13521 617 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
NPHP1-205ENST00000418527 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
NPHP1-205ENST00000418527 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
NPHP1-205ENST00000418527 FERMT3Q86UX7 667 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 SCYL3Q8IZE3 742 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 FBXO18Q8NFZ0 1043 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 SPZ1Q9BXG8 430 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 VAT1LQ9HCJ6 419 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 TMX2Q9Y320 296 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 CSADQ9Y600 493 aa12.32□□□□□ -0.44
NPHP1-205ENST00000418527 BAZ2BQ9UIF8 2168 aaKnown RBP12.31□□□□□ -0.44
NPHP1-205ENST00000418527 DPYSL4O14531 572 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 HRO43593 1189 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 BAG4O95429 457 aaKnown RBP12.31□□□□□ -0.44
NPHP1-205ENST00000418527 NDUFB10O96000 172 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 BMP3P12645 472 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 INPP5BP32019 993 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 JAG1P78504 1218 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 PRKG1Q13976 671 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 NFKBIBQ15653 356 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 PFKFB3Q16875 520 aaPredicted RBP12.31□□□□□ -0.44
NPHP1-205ENST00000418527 FOXD4L6Q3SYB3 417 aaPredicted RBP12.31□□□□□ -0.44
NPHP1-205ENST00000418527 KRT40Q6A162 431 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 FOXD4L3Q6VB84 417 aaPredicted RBP12.31□□□□□ -0.44
NPHP1-205ENST00000418527 KCTD1Q719H9 257 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 ARMC9Q7Z3E5 817 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
NPHP1-205ENST00000418527 CDCA5Q96FF9 252 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 GMCL1Q96IK5 515 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 UBA5Q9GZZ9 404 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 VCPKMTQ9H867 229 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 RRAGCQ9HB90 399 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 ZNF112Q9UJU3 913 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 ATAD5Q96QE3 1844 aa12.31□□□□□ -0.44
NPHP1-205ENST00000418527 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
NPHP1-205ENST00000418527 hCG_1642624A0A1W2PR95 340 aa12.3□□□□□ -0.44
NPHP1-205ENST00000418527 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
NPHP1-205ENST00000418527 EVI5O60447 810 aa12.3□□□□□ -0.44
NPHP1-205ENST00000418527 CALML3P27482 149 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms