RNA–Protein interactions for RNA: ENST00000418389.6

NDUFA11-202, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

TSL 2 BASIC

Gene NDUFA11, Length 2,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-202ENST00000418389 USP40Q9NVE5 1235 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 ZNF646O15015 1829 aaPredicted RBP17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 SCN9AQ15858 1988 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 G3V3G9 751 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 NAPAP54920 295 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 TPD52L1Q16890 204 aaPredicted RBP17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 INF2Q27J81 1249 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 ZNF772Q68DY9 489 aaPredicted RBP17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 HOMER1Q86YM7 354 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 IQUBQ8NA54 791 aa17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 RRP36Q96EU6 259 aaKnown RBP17.45■□□□□ 0.38
NDUFA11-202ENST00000418389 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 GREB1LQ9C091 1923 aaPredicted RBP17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 USP27XA6NNY8 438 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 USP17L5A8MUK1 530 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 AKR1B1P15121 316 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 ZNF18P17022 549 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 LONP1P36776 959 aaKnown RBP17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 HSP90AA4PQ58FG1 418 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 PDXDC2PQ6P474 469 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 ZMYND12Q9H0C1 365 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 MTMR4Q9NYA4 1195 aa17.44■□□□□ 0.38
NDUFA11-202ENST00000418389 SMARCA1P28370 1054 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 ERCC5P28715 1186 aaPredicted RBP17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 DHX8Q14562 1220 aaKnown RBP17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 TSC1Q92574 1164 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 GSDMAQ96QA5 445 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 PYM1Q9BRP8 204 aaKnown RBP17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 TMEM232C9JQI7 657 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 CDC42EP5Q6NZY7 148 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 VSTM4Q8IW00 320 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 CCDC12Q8WUD4 166 aaPredicted RBP17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 STAMQ92783 540 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 TEKT1Q969V4 418 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 INTS13Q9NVM9 706 aa17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
NDUFA11-202ENST00000418389 IGKV6D-41A0A0C4DH26 115 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 PDHBP11177 359 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 LRRC47Q8N1G4 583 aaKnown RBP17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 PIGSQ96S52 555 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 TMEM60Q9H2L4 133 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 DBNDD1Q9H9R9 158 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 VAT1LQ9HCJ6 419 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 SIPA1L1O43166 1804 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 FRMPD2Q68DX3 1309 aaPredicted RBP17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 TNNT1P13805 278 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 CD44P16070 742 aaKnown RBP17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 CLEC10AQ8IUN9 316 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 UBA5Q9GZZ9 404 aa17.42■□□□□ 0.38
NDUFA11-202ENST00000418389 CDC25AP30304 524 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 GTF2F1P35269 517 aaKnown RBP eCLIP17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 TXLNAP40222 546 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 CUL4BQ13620 913 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 CT47A1Q5JQC4 288 aaPredicted RBP17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 KRT25Q7Z3Z0 450 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 MTRQ99707 1265 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 C6orf50Q9HD87 102 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 SWAP70Q9UH65 585 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 C10orf71Q711Q0 1435 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 MYO3BQ8WXR4 1341 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 SYNRGQ9UMZ2 1314 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 SMCO2A6NFE2 343 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 DTHD1Q6ZMT9 781 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 CCAR2Q8N163 923 aaKnown RBP17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 BLZF1Q9H2G9 400 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 KCNQ5Q9NR82 932 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 KCND1Q9NSA2 647 aa17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 SAMSN1Q9NSI8 373 aaKnown RBP17.41■□□□□ 0.38
NDUFA11-202ENST00000418389 GTPBP6O43824 516 aaPredicted RBP17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 CDK11BP21127 795 aaKnown RBP17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 SHMT1P34896 483 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 PTPN21Q16825 1174 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 ASPRV1Q53RT3 343 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 SMYD4Q8IYR2 804 aaPredicted RBP17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 ZNF710Q8N1W2 664 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 RIOK3O14730 519 aaKnown RBP17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 GNA11P29992 359 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 CRKP46108 304 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 CBX1P83916 185 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 KARSQ15046 597 aaKnown RBP17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 NONOQ15233 471 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■■□ 19.3
NDUFA11-202ENST00000418389 SOGA3Q5TF21 947 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 PODNQ7Z5L7 613 aa17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 TRMT1Q9NXH9 659 aaKnown RBP17.4■□□□□ 0.38
NDUFA11-202ENST00000418389 PPP1R3GB7ZBB8 358 aa17.39■□□□□ 0.37
NDUFA11-202ENST00000418389 LAD1O00515 517 aa17.39■□□□□ 0.37
NDUFA11-202ENST00000418389 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms