RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 UPF1Q92900 1129 aaKnown RBP eCLIP19.18■□□□□ 0.663e-13■□□□□ 10
SSBP3-205ENST00000417664 PIGSQ96S52 555 aa19.18■□□□□ 0.66
SSBP3-205ENST00000417664 PNMA6FA0A0J9YX94 578 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 TCP10L2B9ZVM9 353 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 PTGER2P43116 358 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 ATP2B2Q01814 1243 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 ZRSR1Q15695 479 aaKnown RBP19.17■□□□□ 0.66
SSBP3-205ENST00000417664 RASGRP2Q7LDG7 609 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 HOMER1Q86YM7 354 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 GMCL1P1Q8NEA9 526 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 CCDC34Q96HJ3 373 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 UBA5Q9GZZ9 404 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.17■□□□□ 0.661e-6■■■■■ 31.8
SSBP3-205ENST00000417664 PCDHA6Q9UN73 950 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 BCS1LQ9Y276 419 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 PCDHA8Q9Y5H6 950 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 FRMPD2Q68DX3 1309 aaPredicted RBP19.17■□□□□ 0.66
SSBP3-205ENST00000417664 CLRN2A0PK11 232 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 ZNF165P49910 485 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 ZNF280AP59817 542 aaPredicted RBP19.17■□□□□ 0.66
SSBP3-205ENST00000417664 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 KANK3Q6NY19 840 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 CLEC10AQ8IUN9 316 aa19.17■□□□□ 0.66
SSBP3-205ENST00000417664 SMCO2A6NFE2 343 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 FAM196BA6NMK8 535 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 ORC2Q13416 577 aaPredicted RBP19.16■□□□□ 0.66
SSBP3-205ENST00000417664 SEPT2Q15019 361 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 CCDC96Q2M329 555 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 DPF2Q92785 391 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 MTMR8Q96EF0 704 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 GMCL1Q96IK5 515 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 PYM1Q9BRP8 204 aaKnown RBP19.16■□□□□ 0.66
SSBP3-205ENST00000417664 NAT10Q9H0A0 1025 aaKnown RBP19.16■□□□□ 0.66
SSBP3-205ENST00000417664 VAT1LQ9HCJ6 419 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 CNTNAP1P78357 1384 aa19.16■□□□□ 0.66
SSBP3-205ENST00000417664 LAD1O00515 517 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 SLC1A4P43007 532 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 TNNI2P48788 182 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 PTGDRQ13258 359 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 ZNF174Q15697 407 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 KRBA2Q6ZNG9 492 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 ADGRF4Q8IZF3 695 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 GLT8D2Q9H1C3 349 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 CPVLQ9H3G5 476 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 GPCPD1Q9NPB8 672 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 MYOZ2Q9NPC6 264 aa19.15■□□□□ 0.66
SSBP3-205ENST00000417664 WNT10BO00744 389 aa19.14■□□□□ 0.66
SSBP3-205ENST00000417664 SLFN13Q68D06 897 aa19.14■□□□□ 0.66
SSBP3-205ENST00000417664 SIAH1Q8IUQ4 282 aa19.14■□□□□ 0.66
SSBP3-205ENST00000417664 CNNM3Q8NE01 707 aa19.14■□□□□ 0.66
SSBP3-205ENST00000417664 CSRNP2Q9H175 543 aa19.14■□□□□ 0.66
SSBP3-205ENST00000417664 CBX8Q9HC52 389 aa19.14■□□□□ 0.66
SSBP3-205ENST00000417664 USP25Q9UHP3 1055 aa19.14■□□□□ 0.66
SSBP3-205ENST00000417664 ZBTB5O15062 677 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 GH2P01242 217 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 MAP3K10Q02779 954 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 TNFAIP1Q13829 316 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 NONOQ15233 471 aaKnown RBP eCLIP19.14■□□□□ 0.651e-6■■■□□ 17.3
SSBP3-205ENST00000417664 NOM1Q5C9Z4 860 aaKnown RBP19.14■□□□□ 0.65
SSBP3-205ENST00000417664 CEP57L1Q8IYX8 460 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 DNAJC25Q9H1X3 360 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 VEZTQ9HBM0 779 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 TUBE1Q9UJT0 475 aa19.14■□□□□ 0.65
SSBP3-205ENST00000417664 ARFGEF1Q9Y6D6 1849 aa19.13■□□□□ 0.65
SSBP3-205ENST00000417664 FZD9O00144 591 aa19.13■□□□□ 0.65
SSBP3-205ENST00000417664 GDF11O95390 407 aa19.13■□□□□ 0.65
SSBP3-205ENST00000417664 SLURP2P0DP57 97 aa19.13■□□□□ 0.65
SSBP3-205ENST00000417664 REXO1Q8N1G1 1221 aaKnown RBP19.13■□□□□ 0.65
SSBP3-205ENST00000417664 F5H6K3 240 aa19.12■□□□□ 0.65
SSBP3-205ENST00000417664 MCM7P33993 719 aa19.12■□□□□ 0.65
SSBP3-205ENST00000417664 LONP1P36776 959 aaKnown RBP19.12■□□□□ 0.65
SSBP3-205ENST00000417664 ADCY7P51828 1080 aa19.12■□□□□ 0.65
SSBP3-205ENST00000417664 GRIN1Q05586 938 aa19.12■□□□□ 0.65
SSBP3-205ENST00000417664 KLRC3Q07444 240 aa19.12■□□□□ 0.65
SSBP3-205ENST00000417664 LONRF3Q496Y0 759 aa19.12■□□□□ 0.65
SSBP3-205ENST00000417664 ARHGEF10LQ9HCE6 1279 aa19.12■□□□□ 0.65
SSBP3-205ENST00000417664 WNT7AO00755 349 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 PRPHP41219 470 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 KCTD1Q719H9 257 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 C4orf32Q8N8J7 132 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 RASGRP4Q8TDF6 673 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 BPIFA3Q9BQP9 254 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 ADAMTS3O15072 1205 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 POLR2DO15514 142 aaKnown RBP19.11■□□□□ 0.65
SSBP3-205ENST00000417664 NLRP12P59046 1061 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 TTBK2Q6IQ55 1244 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 LUZP1Q86V48 1076 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 RIC8AQ9NPQ8 531 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 PGAP2Q9UHJ9 254 aa19.11■□□□□ 0.65
SSBP3-205ENST00000417664 GOLGA6L19H0YKK7 550 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 MRPL12P52815 198 aaKnown RBP19.1■□□□□ 0.65
SSBP3-205ENST00000417664 IQCB1Q15051 598 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 INF2Q27J81 1249 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 NBPF9Q3BBW0 867 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 SPECC1Q5M775 1068 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 BTNL9Q6UXG8 535 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 NEK8Q86SG6 692 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 TEX2Q8IWB9 1127 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 SH2D4AQ9H788 454 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms