RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 RHOXF2BP0C7M4 288 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 ARHGAP25P42331 645 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 TRAPPC10P48553 1259 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 LONRF2Q1L5Z9 754 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 RHOXF2Q9BQY4 288 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 CYTH3O43739 400 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 DZIP1Q86YF9 867 aaKnown RBP16.33■□□□□ 0.2
HDAC9-208ENST00000417496 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
HDAC9-208ENST00000417496 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
HDAC9-208ENST00000417496 GOLGB1Q14789 3259 aaKnown RBP16.32■□□□□ 0.2
HDAC9-208ENST00000417496 TTC26A0AVF1 554 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 PARP1P09874 1014 aaKnown RBP16.32■□□□□ 0.2
HDAC9-208ENST00000417496 KIF5BP33176 963 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
HDAC9-208ENST00000417496 TMTC1Q8IUR5 882 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
HDAC9-208ENST00000417496 NLRP3Q96P20 1036 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 GPR101Q96P66 508 aaPredicted RBP16.32■□□□□ 0.2
HDAC9-208ENST00000417496 PCDHA4Q9UN74 947 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 STX8Q9UNK0 236 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 CYP2C19P33261 490 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
HDAC9-208ENST00000417496 USP5P45974 858 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 DTHD1Q6ZMT9 781 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 NEK11Q8NG66 645 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 MAD2L2Q9UI95 211 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 GUCA1BQ9UMX6 200 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 PCDHA6Q9UN73 950 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 PCDHA8Q9Y5H6 950 aa16.32■□□□□ 0.2
HDAC9-208ENST00000417496 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
HDAC9-208ENST00000417496 ENC1O14682 589 aa16.31■□□□□ 0.2
HDAC9-208ENST00000417496 MCM6Q14566 821 aa16.31■□□□□ 0.2
HDAC9-208ENST00000417496 CYP26C1Q6V0L0 522 aa16.31■□□□□ 0.2
HDAC9-208ENST00000417496 SAP30BPQ9UHR5 308 aaKnown RBP16.31■□□□□ 0.2
HDAC9-208ENST00000417496 REXO2Q9Y3B8 237 aaKnown RBP16.31■□□□□ 0.2
HDAC9-208ENST00000417496 ARL6IP4Q66PJ3 421 aaKnown RBP16.3■□□□□ 0.2
HDAC9-208ENST00000417496 NCAPH2Q6IBW4 605 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 ADSSL1Q8N142 457 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 CDCA7Q9BWT1 371 aaPredicted RBP16.3■□□□□ 0.2
HDAC9-208ENST00000417496 TTF2Q9UNY4 1162 aaKnown RBP16.3■□□□□ 0.2
HDAC9-208ENST00000417496 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDAC9-208ENST00000417496 FECHP22830 423 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 CALML3P27482 149 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 UBA7P41226 1012 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 C12orf60Q5U649 245 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 ANKRD20A12PQ8NF67 263 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 CCDC51Q96ER9 411 aa16.3■□□□□ 0.2
HDAC9-208ENST00000417496 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.3■□□□□ 0.2
HDAC9-208ENST00000417496 H3BQF6 201 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 KLK7P49862 253 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 NOA1Q8NC60 698 aaKnown RBP16.29■□□□□ 0.2
HDAC9-208ENST00000417496 RMND1Q9NWS8 449 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 CCDC151A5D8V7 595 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 M0R2N6 131 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 TSPY3P0CV98 308 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 TSPY8P0CW00 308 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 SPAG1Q07617 926 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 MB21D1Q8N884 522 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 NAPGQ99747 312 aaPredicted RBP16.29■□□□□ 0.2
HDAC9-208ENST00000417496 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
HDAC9-208ENST00000417496 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
HDAC9-208ENST00000417496 EPN1Q9Y6I3 576 aaPredicted RBP16.29■□□□□ 0.2
HDAC9-208ENST00000417496 MYH8P13535 1937 aa16.29■□□□□ 0.2
HDAC9-208ENST00000417496 COL16A1Q07092 1604 aaPredicted RBP16.29■□□□□ 0.2
HDAC9-208ENST00000417496 B4DLN1 442 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 H7C1D1 291 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 ATP8B1O43520 1251 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 KLRC4O43908 158 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 NDUFA10O95299 355 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 CEP112Q8N8E3 955 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 HPS3Q969F9 1004 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 ANKIB1Q9P2G1 1089 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 KDM4FA0A1W2PPD8 638 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 FAM98CQ17RN3 349 aaKnown RBP16.28■□□□□ 0.2
HDAC9-208ENST00000417496 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
HDAC9-208ENST00000417496 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
HDAC9-208ENST00000417496 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
HDAC9-208ENST00000417496 SRGAP2O75044 1071 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 TM4SF1P30408 202 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 VSNL1P62760 191 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 WDR59Q6PJI9 974 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 VAT1LQ9HCJ6 419 aa16.27■□□□□ 0.2
HDAC9-208ENST00000417496 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms