RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 PPP1R12AO14974 1030 aaPredicted RBP16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 PDE6BP35913 854 aa16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 TOB1P50616 345 aaPredicted RBP16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 NAP1L1P55209 391 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 HDLBPQ00341 1268 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 CDKAL1Q5VV42 579 aa16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 RPGRIP1Q96KN7 1286 aa16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 BLZF1Q9H2G9 400 aa16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 AFDNP55196 1824 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-204ENST00000416649 E7EVH7 732 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 KRT86O43790 486 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 IPO7O95373 1038 aaKnown RBP16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 GCFC2P16383 781 aaKnown RBP16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 ADORA1P30542 326 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 CXCR5P32302 372 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 COPB1P53618 953 aaKnown RBP16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 DPYDQ12882 1025 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 CUL4BQ13620 913 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 RRAGBQ5VZM2 374 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 GPIHBP1Q8IV16 184 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 ZNF473Q8WTR7 871 aaKnown RBP16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 LACRTQ9GZZ8 138 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 PPANQ9NQ55 473 aaKnown RBP16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 TOGARAM1Q9Y4F4 1720 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 TTC26A0AVF1 554 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 ZBTB43O43298 467 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 HERVK_113P62684 666 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 CYP27A1Q02318 531 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 APOA5Q6Q788 366 aa16.43■□□□□ 0.22
NCKIPSD-204ENST00000416649 B4E1Z4 1266 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 PPP1R12BO60237 982 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 HPDP32754 393 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 BIRC2Q13490 618 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 PAPD7Q5XG87 772 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 IQCEQ6IPM2 695 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 BICDL1Q6ZP65 573 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 XAGE2Q96GT9 111 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 FAXDC2Q96IV6 333 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 ZIM3Q96PE6 472 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 UBN2Q6ZU65 1347 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 SNAP23O00161 211 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 SNCBQ16143 134 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 CYB5R4Q7L1T6 521 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 TEX11Q8IYF3 940 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 DDX20Q9UHI6 824 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 LUC7L2Q9Y383 392 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 A0A087X0B3 334 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 GOLGA6L7A0A1B0GV03 622 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 EZRP15311 586 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 SSRP1Q08945 709 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 SCARF1Q14162 830 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 TTF1Q15361 905 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 ATG9AQ7Z3C6 839 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 OR8K1Q8NGG5 319 aa16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
NCKIPSD-204ENST00000416649 BCL9O00512 1426 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 RCCD1A6NED2 376 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 FOXP2O15409 715 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 SMTNP53814 917 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 CCDC121Q6ZUS5 278 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 EEF2KMTQ96G04 330 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 CCT8L2Q96SF2 557 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 DNA2P51530 1060 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 ITPK1Q13572 414 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 CCDC181Q5TID7 509 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 EGFL6Q8IUX8 553 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 FBXL16Q8N461 479 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 IFT81Q8WYA0 676 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 CCDC43Q96MW1 224 aaKnown RBP16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 EPN3Q9H201 632 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 GREM2Q9H772 168 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 ARFGEF2Q9Y6D5 1785 aa16.41■□□□□ 0.22
NCKIPSD-204ENST00000416649 GLI3P10071 1580 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 MAP3K15Q6ZN16 1313 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 LOC102724428A0A0B4J2F2 783 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 KCNJ18B7U540 433 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 PPP1R3GB7ZBB8 358 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 SIK1P57059 783 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 SKOR1P84550 965 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 KCNJ12Q14500 433 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 CFAP58Q5T655 872 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 PAGE5Q96GU1 130 aa16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 TACO1Q9BSH4 297 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-204ENST00000416649 ITIH6Q6UXX5 1313 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms