RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ATP2A1O14983 1001 aa24.21■■□□□ 1.47
PTPRU-203ENST00000415600 IGHA2P01877 340 aa24.21■■□□□ 1.47
PTPRU-203ENST00000415600 MCMDC2Q4G0Z9 681 aa24.21■■□□□ 1.47
PTPRU-203ENST00000415600 SLFN13Q68D06 897 aa24.21■■□□□ 1.47
PTPRU-203ENST00000415600 KIFC2Q96AC6 838 aa24.21■■□□□ 1.47
PTPRU-203ENST00000415600 PFASO15067 1338 aa24.21■■□□□ 1.47
PTPRU-203ENST00000415600 PARP14Q460N5 1801 aa24.21■■□□□ 1.47
PTPRU-203ENST00000415600 BMP3P12645 472 aa24.2■■□□□ 1.47
PTPRU-203ENST00000415600 OAZ1P54368 228 aa24.2■■□□□ 1.47
PTPRU-203ENST00000415600 FAM47AQ5JRC9 791 aa24.2■■□□□ 1.47
PTPRU-203ENST00000415600 CCDC129Q6ZRS4 1044 aa24.2■■□□□ 1.47
PTPRU-203ENST00000415600 LRRC47Q8N1G4 583 aaKnown RBP24.2■■□□□ 1.47
PTPRU-203ENST00000415600 REPS2Q8NFH8 660 aa24.2■■□□□ 1.47
PTPRU-203ENST00000415600 DDX11Q96FC9 970 aa24.2■■□□□ 1.47
PTPRU-203ENST00000415600 FBXO40Q9UH90 709 aa24.2■■□□□ 1.47
PTPRU-203ENST00000415600 ALX1Q15699 326 aa24.2■■□□□ 1.46
PTPRU-203ENST00000415600 MSL3Q8N5Y2 521 aaKnown RBP24.2■■□□□ 1.46
PTPRU-203ENST00000415600 CHURC1Q8WUH1 139 aa24.2■■□□□ 1.46
PTPRU-203ENST00000415600 SENP6Q9GZR1 1112 aaPredicted RBP24.2■■□□□ 1.46
PTPRU-203ENST00000415600 ANAPC4Q9UJX5 808 aa24.2■■□□□ 1.46
PTPRU-203ENST00000415600 STX8Q9UNK0 236 aa24.2■■□□□ 1.46
PTPRU-203ENST00000415600 CNPY2Q9Y2B0 182 aa24.2■■□□□ 1.46
PTPRU-203ENST00000415600 SLC1A4P43007 532 aa24.19■■□□□ 1.46
PTPRU-203ENST00000415600 STAT2P52630 851 aa24.19■■□□□ 1.46
PTPRU-203ENST00000415600 IKQ13123 557 aaPredicted RBP24.19■■□□□ 1.46
PTPRU-203ENST00000415600 FAM160B2Q86V87 743 aa24.19■■□□□ 1.46
PTPRU-203ENST00000415600 CPXCR1Q8N123 301 aa24.19■■□□□ 1.46
PTPRU-203ENST00000415600 TRPV1Q8NER1 839 aa24.19■■□□□ 1.46
PTPRU-203ENST00000415600 TINF2Q9BSI4 451 aa24.19■■□□□ 1.46
PTPRU-203ENST00000415600 PRO3102Q9H379 93 aa24.19■■□□□ 1.46
PTPRU-203ENST00000415600 ZMYND8Q9ULU4 1186 aaPredicted RBP24.19■■□□□ 1.46
PTPRU-203ENST00000415600 MYH4Q9Y623 1939 aa24.18■■□□□ 1.46
PTPRU-203ENST00000415600 RANBP6O60518 1105 aaKnown RBP24.18■■□□□ 1.46
PTPRU-203ENST00000415600 PGK2P07205 417 aa24.18■■□□□ 1.46
PTPRU-203ENST00000415600 C8orf34Q49A92 452 aa24.18■■□□□ 1.46
PTPRU-203ENST00000415600 CHD1LQ86WJ1 897 aa24.18■■□□□ 1.46
PTPRU-203ENST00000415600 RILPL2Q969X0 211 aa24.18■■□□□ 1.46
PTPRU-203ENST00000415600 GMCL1Q96IK5 515 aa24.18■■□□□ 1.46
PTPRU-203ENST00000415600 SLC38A10Q9HBR0 1119 aa24.18■■□□□ 1.46
PTPRU-203ENST00000415600 RARBP10826 455 aa24.17■■□□□ 1.46
PTPRU-203ENST00000415600 BMP8BP34820 402 aa24.17■■□□□ 1.46
PTPRU-203ENST00000415600 ZNF792Q3KQV3 632 aa24.17■■□□□ 1.46
PTPRU-203ENST00000415600 CHST13Q8NET6 341 aa24.17■■□□□ 1.46
PTPRU-203ENST00000415600 TOMM22Q9NS69 142 aa24.17■■□□□ 1.46
PTPRU-203ENST00000415600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.17■■□□□ 1.46
PTPRU-203ENST00000415600 COL11A1P12107 1806 aaPredicted RBP24.17■■□□□ 1.46
PTPRU-203ENST00000415600 ORC4O43929 436 aa24.16■■□□□ 1.46
PTPRU-203ENST00000415600 SLC4A3P48751 1232 aa24.16■■□□□ 1.46
PTPRU-203ENST00000415600 CTDSPL2Q05D32 466 aa24.16■■□□□ 1.46
PTPRU-203ENST00000415600 PRKAG2Q9UGJ0 569 aa24.16■■□□□ 1.46
PTPRU-203ENST00000415600 TMEM232C9JQI7 657 aa24.16■■□□□ 1.46
PTPRU-203ENST00000415600 MYCNP04198 464 aaPredicted RBP24.16■■□□□ 1.46
PTPRU-203ENST00000415600 ZMYM6O95789 1325 aa24.16■■□□□ 1.46
PTPRU-203ENST00000415600 PCP11498 1178 aaKnown RBP24.15■■□□□ 1.46
PTPRU-203ENST00000415600 LRRC26Q2I0M4 334 aa24.15■■□□□ 1.46
PTPRU-203ENST00000415600 VPS53Q5VIR6 699 aa24.15■■□□□ 1.46
PTPRU-203ENST00000415600 ANKRD35Q8N283 1001 aa24.15■■□□□ 1.46
PTPRU-203ENST00000415600 FAM227BQ96M60 508 aa24.15■■□□□ 1.46
PTPRU-203ENST00000415600 ALPK3Q96L96 1907 aa24.14■■□□□ 1.46
PTPRU-203ENST00000415600 CCDC171Q6TFL3 1326 aa24.14■■□□□ 1.46
PTPRU-203ENST00000415600 SYNGAP1Q96PV0 1343 aa24.14■■□□□ 1.46
PTPRU-203ENST00000415600 HIP1O00291 1037 aa24.14■■□□□ 1.45
PTPRU-203ENST00000415600 SYN1P17600 705 aa24.14■■□□□ 1.45
PTPRU-203ENST00000415600 PRAMEF19Q5SWL8 479 aa24.14■■□□□ 1.45
PTPRU-203ENST00000415600 GJC2Q5T442 439 aaPredicted RBP24.14■■□□□ 1.45
PTPRU-203ENST00000415600 STAG1Q8WVM7 1258 aa24.14■■□□□ 1.45
PTPRU-203ENST00000415600 GDF15Q99988 308 aa24.14■■□□□ 1.45
PTPRU-203ENST00000415600 RAVER2Q9HCJ3 691 aaKnown RBP24.14■■□□□ 1.45
PTPRU-203ENST00000415600 FRMPD3Q5JV73 1810 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 A0A0D9SFI3 127 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 FOXP2O15409 715 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 PLA2G6O60733 806 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 FGAP02671 866 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 AKR1A1P14550 325 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 NMIQ13287 307 aaPredicted RBP24.13■■□□□ 1.45
PTPRU-203ENST00000415600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.13■■□□□ 1.45
PTPRU-203ENST00000415600 ZNF467Q7Z7K2 595 aaPredicted RBP24.13■■□□□ 1.45
PTPRU-203ENST00000415600 RNF180Q86T96 592 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 LBHD1Q9BQE6 289 aaPredicted RBP24.13■■□□□ 1.45
PTPRU-203ENST00000415600 OSBPL3Q9H4L5 887 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 XPNPEP3Q9NQH7 507 aa24.13■■□□□ 1.45
PTPRU-203ENST00000415600 ZNFX1Q9P2E3 1918 aaKnown RBP24.13■■□□□ 1.45
PTPRU-203ENST00000415600 RANBP2P49792 3224 aaKnown RBP24.12■■□□□ 1.45
PTPRU-203ENST00000415600 HSPD1P10809 573 aaKnown RBP24.12■■□□□ 1.45
PTPRU-203ENST00000415600 MCCP23508 829 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 TKFCQ3LXA3 575 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 ANO1Q5XXA6 986 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 RCSD1Q6JBY9 416 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 RNF41Q9H4P4 317 aaPredicted RBP24.12■■□□□ 1.45
PTPRU-203ENST00000415600 DIAPH3Q9NSV4 1193 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 FGRP09769 529 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 MAGEA10P43363 369 aaPredicted RBP24.12■■□□□ 1.45
PTPRU-203ENST00000415600 NT5C2P49902 561 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 ATN1P54259 1190 aaPredicted RBP24.12■■□□□ 1.45
PTPRU-203ENST00000415600 RRP12Q5JTH9 1297 aaKnown RBP24.12■■□□□ 1.45
PTPRU-203ENST00000415600 ACAD9Q9H845 621 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 RIPK3Q9Y572 518 aa24.12■■□□□ 1.45
PTPRU-203ENST00000415600 MFSD6Q6ZSS7 791 aa24.11■■□□□ 1.45
PTPRU-203ENST00000415600 PLEKHM2Q8IWE5 1019 aa24.11■■□□□ 1.45
PTPRU-203ENST00000415600 DCAF4Q8WV16 495 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms