RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 OSBPL3Q9H4L5 887 aa29.61■■■□□ 2.33
HLA-C-204ENST00000415537 INCENPQ9NQS7 918 aa29.61■■■□□ 2.33
HLA-C-204ENST00000415537 STX8Q9UNK0 236 aa29.61■■■□□ 2.33
HLA-C-204ENST00000415537 IGHA2P01877 340 aa29.6■■■□□ 2.33
HLA-C-204ENST00000415537 FGAP02671 866 aa29.6■■■□□ 2.33
HLA-C-204ENST00000415537 SLC4A3P48751 1232 aa29.6■■■□□ 2.33
HLA-C-204ENST00000415537 MFAP1P55081 439 aaKnown RBP29.6■■■□□ 2.33
HLA-C-204ENST00000415537 TOMM22Q9NS69 142 aa29.6■■■□□ 2.33
HLA-C-204ENST00000415537 HSPD1P10809 573 aaKnown RBP29.59■■■□□ 2.33
HLA-C-204ENST00000415537 C7orf61Q8IZ16 206 aa29.59■■■□□ 2.33
HLA-C-204ENST00000415537 CPXCR1Q8N123 301 aa29.59■■■□□ 2.33
HLA-C-204ENST00000415537 TRPV1Q8NER1 839 aa29.59■■■□□ 2.33
HLA-C-204ENST00000415537 PFASO15067 1338 aa29.58■■■□□ 2.33
HLA-C-204ENST00000415537 PGK2P07205 417 aa29.58■■■□□ 2.33
HLA-C-204ENST00000415537 SDSP20132 328 aa29.58■■■□□ 2.33
HLA-C-204ENST00000415537 CCDC171Q6TFL3 1326 aa29.58■■■□□ 2.33
HLA-C-204ENST00000415537 ZNF589Q86UQ0 364 aaPredicted RBP29.58■■■□□ 2.33
HLA-C-204ENST00000415537 SLC1A4P43007 532 aa29.57■■■□□ 2.32
HLA-C-204ENST00000415537 IKQ13123 557 aaPredicted RBP29.57■■■□□ 2.32
HLA-C-204ENST00000415537 SLC38A10Q9HBR0 1119 aa29.57■■■□□ 2.32
HLA-C-204ENST00000415537 DIS3Q9Y2L1 958 aaKnown RBP29.57■■■□□ 2.32
HLA-C-204ENST00000415537 TMEM232C9JQI7 657 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 ATP2A1O14983 1001 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 ORC4O43929 436 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 COL6A1P12109 1028 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 STAT2P52630 851 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 RRP12Q5JTH9 1297 aaKnown RBP29.56■■■□□ 2.32
HLA-C-204ENST00000415537 CHURC1Q8WUH1 139 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 DDX11Q96FC9 970 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 RAVER2Q9HCJ3 691 aaKnown RBP29.56■■■□□ 2.32
HLA-C-204ENST00000415537 IL17RBQ9NRM6 502 aa29.56■■■□□ 2.32
HLA-C-204ENST00000415537 RBM27Q9P2N5 1060 aaKnown RBP29.56■■■□□ 2.32
HLA-C-204ENST00000415537 ZMYM6O95789 1325 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 SEPT4O43236 478 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 NMT2O60551 498 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 FDX1P10109 184 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 MCCP23508 829 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 PRAMEF19Q5SWL8 479 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 CHMP4CQ96CF2 233 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 GMCL1Q96IK5 515 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 RIPK3Q9Y572 518 aa29.55■■■□□ 2.32
HLA-C-204ENST00000415537 FGRP09769 529 aa29.54■■■□□ 2.32
HLA-C-204ENST00000415537 ZNF792Q3KQV3 632 aa29.54■■■□□ 2.32
HLA-C-204ENST00000415537 FAM160B2Q86V87 743 aa29.54■■■□□ 2.32
HLA-C-204ENST00000415537 TINF2Q9BSI4 451 aa29.54■■■□□ 2.32
HLA-C-204ENST00000415537 DIAPH3Q9NSV4 1193 aa29.54■■■□□ 2.32
HLA-C-204ENST00000415537 TACC3Q9Y6A5 838 aa29.54■■■□□ 2.32
HLA-C-204ENST00000415537 HIP1O00291 1037 aa29.53■■■□□ 2.32
HLA-C-204ENST00000415537 OAZ1P54368 228 aa29.53■■■□□ 2.32
HLA-C-204ENST00000415537 ANO1Q5XXA6 986 aa29.53■■■□□ 2.32
HLA-C-204ENST00000415537 ARRDC4Q8NCT1 418 aa29.53■■■□□ 2.32
HLA-C-204ENST00000415537 STAG1Q8WVM7 1258 aa29.53■■■□□ 2.32
HLA-C-204ENST00000415537 SENP6Q9GZR1 1112 aaPredicted RBP29.53■■■□□ 2.32
HLA-C-204ENST00000415537 NRBP1Q9UHY1 535 aa29.53■■■□□ 2.32
HLA-C-204ENST00000415537 DNM1LO00429 736 aa29.52■■■□□ 2.32
HLA-C-204ENST00000415537 HAND2P61296 217 aa29.52■■■□□ 2.32
HLA-C-204ENST00000415537 CWC27Q6UX04 472 aaKnown RBP29.52■■■□□ 2.32
HLA-C-204ENST00000415537 FBXO40Q9UH90 709 aa29.52■■■□□ 2.32
HLA-C-204ENST00000415537 ZMYND8Q9ULU4 1186 aaPredicted RBP29.52■■■□□ 2.32
HLA-C-204ENST00000415537 MTMR7Q9Y216 660 aa29.52■■■□□ 2.32
HLA-C-204ENST00000415537 FXR1P51114 621 aaKnown RBP eCLIP29.51■■■□□ 2.31
HLA-C-204ENST00000415537 RCSD1Q6JBY9 416 aa29.51■■■□□ 2.31
HLA-C-204ENST00000415537 CHST13Q8NET6 341 aa29.51■■■□□ 2.31
HLA-C-204ENST00000415537 SMCHD1A6NHR9 2005 aa29.5■■■□□ 2.31
HLA-C-204ENST00000415537 MYCNP04198 464 aaPredicted RBP29.5■■■□□ 2.31
HLA-C-204ENST00000415537 GJC2Q5T442 439 aaPredicted RBP29.5■■■□□ 2.31
HLA-C-204ENST00000415537 MFSD6Q6ZSS7 791 aa29.5■■■□□ 2.31
HLA-C-204ENST00000415537 KCTD1Q719H9 257 aa29.5■■■□□ 2.31
HLA-C-204ENST00000415537 ANKRD35Q8N283 1001 aa29.5■■■□□ 2.31
HLA-C-204ENST00000415537 KBTBD13C9JR72 458 aa29.49■■■□□ 2.31
HLA-C-204ENST00000415537 PLA2G6O60733 806 aa29.49■■■□□ 2.31
HLA-C-204ENST00000415537 PCP11498 1178 aaKnown RBP29.49■■■□□ 2.31
HLA-C-204ENST00000415537 LRRC26Q2I0M4 334 aa29.49■■■□□ 2.31
HLA-C-204ENST00000415537 AKNAD1Q5T1N1 836 aa29.49■■■□□ 2.31
HLA-C-204ENST00000415537 CNPY2Q9Y2B0 182 aa29.49■■■□□ 2.31
HLA-C-204ENST00000415537 SYN1P17600 705 aa29.48■■■□□ 2.31
HLA-C-204ENST00000415537 NOVP48745 357 aa29.48■■■□□ 2.31
HLA-C-204ENST00000415537 IRX6P78412 446 aaPredicted RBP29.48■■■□□ 2.31
HLA-C-204ENST00000415537 MSL3Q8N5Y2 521 aaKnown RBP29.48■■■□□ 2.31
HLA-C-204ENST00000415537 PRO3102Q9H379 93 aa29.48■■■□□ 2.31
HLA-C-204ENST00000415537 RNF41Q9H4P4 317 aaPredicted RBP29.48■■■□□ 2.31
HLA-C-204ENST00000415537 TCP11L1Q9NUJ3 509 aa29.48■■■□□ 2.31
HLA-C-204ENST00000415537 ZNF213O14771 459 aa29.47■■■□□ 2.31
HLA-C-204ENST00000415537 RARBP10826 455 aa29.47■■■□□ 2.31
HLA-C-204ENST00000415537 CCDC96Q2M329 555 aa29.47■■■□□ 2.31
HLA-C-204ENST00000415537 DCAF4Q8WV16 495 aa29.47■■■□□ 2.31
HLA-C-204ENST00000415537 HOMER2Q9NSB8 354 aa29.47■■■□□ 2.31
HLA-C-204ENST00000415537 DNAJC25-GNG10A0A024R161 153 aa29.46■■■□□ 2.31
HLA-C-204ENST00000415537 TOP1P11387 765 aaKnown RBP29.46■■■□□ 2.31
HLA-C-204ENST00000415537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.46■■■□□ 2.31
HLA-C-204ENST00000415537 TRIOBPQ9H2D6 2365 aa29.46■■■□□ 2.31
HLA-C-204ENST00000415537 ATN1P54259 1190 aaPredicted RBP29.45■■■□□ 2.31
HLA-C-204ENST00000415537 ACAD9Q9H845 621 aa29.45■■■□□ 2.31
HLA-C-204ENST00000415537 SYNGAP1Q96PV0 1343 aa29.45■■■□□ 2.3
HLA-C-204ENST00000415537 A0A1W2PPC1 479 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 AKR1A1P14550 325 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 TAL1P17542 331 aaPredicted RBP29.44■■■□□ 2.3
HLA-C-204ENST00000415537 TKFCQ3LXA3 575 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 CCDC174Q6PII3 467 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 ZNF467Q7Z7K2 595 aaPredicted RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms