RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 FAM173BQ6P4H8 233 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 NBPF11Q86T75 865 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 FOXP4Q8IVH2 680 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-211ENST00000415409 RDH13Q8NBN7 331 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 LEO1Q8WVC0 666 aaPredicted RBP7.66□□□□□ -1.18
HDAC8-211ENST00000415409 GMLQ99445 158 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 TMEM47Q9BQJ4 181 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 SLC6A16Q9GZN6 736 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 TDRD3Q9H7E2 651 aaKnown RBP7.66□□□□□ -1.18
HDAC8-211ENST00000415409 BRMS1Q9HCU9 246 aa7.66□□□□□ -1.18
HDAC8-211ENST00000415409 MPHOSPH10O00566 681 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 GADD45BO75293 160 aaPredicted RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 LETM1O95202 739 aaPredicted RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 PLEKHA8P1O95397 391 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 RPS12P25398 132 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 BRCA1P38398 1863 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 CACNB3P54284 484 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 CXCL9Q07325 125 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 FUT2Q10981 343 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 TCP10Q12799 353 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 SF3A1Q15459 793 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 GPR162Q16538 588 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 PUS10Q3MIT2 529 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 L1TD1Q5T7N2 865 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 MYSM1Q5VVJ2 828 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 SPRYD7Q5W111 196 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 METTL3Q86U44 580 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 ZNF598Q86UK7 904 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 CMTR1Q8N1G2 835 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 SRBD1Q8N5C6 995 aaKnown RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 MTMR14Q8NCE2 650 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 PRMT6Q96LA8 375 aaPredicted RBP7.65□□□□□ -1.18
HDAC8-211ENST00000415409 AIFM3Q96NN9 605 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 LTBP3Q9NS15 1303 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 MTMR4Q9NYA4 1195 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 RTEL1Q9NZ71 1219 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 RCOR1Q9UKL0 485 aa7.65□□□□□ -1.18
HDAC8-211ENST00000415409 ARFGEF1Q9Y6D6 1849 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 PLIN4Q96Q06 1357 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 IGKV6D-41A0A0C4DH26 115 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 NFKBIEO00221 500 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 TTLL1O95922 423 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 MMP1P03956 469 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 PARP1P09874 1014 aaKnown RBP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 AKR1B1P15121 316 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 U2AF2P26368 475 aaKnown RBP eCLIP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 GUCY1A2P33402 732 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 SHMT1P34896 483 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 ME1P48163 572 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 NOVP48745 357 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 EIF6P56537 245 aaKnown RBP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 ZNF445P59923 1031 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 C1QTNF8P60827 252 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 CEBPZQ03701 1054 aaKnown RBP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 STK38Q15208 465 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 ZSCAN23Q3MJ62 389 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 CERKLQ49MI3 558 aaPredicted RBP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 CCDC183Q5T5S1 534 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 ZNF697Q5TEC3 545 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 FKBP1CQ5VVH2 108 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 NOSTRINQ8IVI9 506 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 ZFPM1Q8IX07 1006 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 DIS3L2Q8IYB7 885 aaKnown RBP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 JMYQ8N9B5 988 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 BICD2Q8TD16 824 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 KCNG4Q8TDN1 519 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 FAM151AQ8WW52 585 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 CEP95Q96GE4 821 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 USP28Q96RU2 1077 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 FOXP1Q9H334 677 aaPredicted RBP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 ZNF70Q9UC06 446 aaPredicted RBP7.64□□□□□ -1.19
HDAC8-211ENST00000415409 PCDHAC2Q9Y5I4 1007 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 MYH7P12883 1935 aa7.64□□□□□ -1.19
HDAC8-211ENST00000415409 CNTNAP5Q8WYK1 1306 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 CLRN2A0PK11 232 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 TESPA1A2RU30 521 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 PALM3A6NDB9 673 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 DDTLA6NHG4 134 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 KIF28PB7ZC32 967 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 TCP10L2B9ZVM9 353 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 KLRF2D3W0D1 207 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 YEATS4O95619 227 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 SCG2P13521 617 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 CALML3P27482 149 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 SMARCA1P28370 1054 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 KRT2P35908 639 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 TNNI2P48788 182 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 NLRP5P59047 1200 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 PLCB2Q00722 1185 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 PKN1Q16512 942 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 PFKFB3Q16875 520 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 ASPRV1Q53RT3 343 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 ANO1Q5XXA6 986 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 METTL16Q86W50 562 aaKnown RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 SCUBE3Q8IX30 993 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 FAM177A1Q8N128 213 aaPredicted RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 CSRNP1Q96S65 589 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 KANSL2Q9H9L4 492 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms