RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 ZNF865P0CJ78 1059 aaPredicted RBP23.1■■□□□ 1.29
UBXN4-202ENST00000415164 RAG1P15918 1043 aa23.1■■□□□ 1.29
UBXN4-202ENST00000415164 KLRC3Q07444 240 aa23.1■■□□□ 1.29
UBXN4-202ENST00000415164 TACC3Q9Y6A5 838 aa23.1■■□□□ 1.29
UBXN4-202ENST00000415164 C1orf53Q5VUE5 145 aa23.09■■□□□ 1.29
UBXN4-202ENST00000415164 ZNF444Q8N0Y2 327 aaPredicted RBP23.09■■□□□ 1.29
UBXN4-202ENST00000415164 OSBP2Q969R2 916 aa23.09■■□□□ 1.29
UBXN4-202ENST00000415164 RNPC3Q96LT9 517 aaKnown RBP23.09■■□□□ 1.29
UBXN4-202ENST00000415164 CDX2Q99626 313 aaPredicted RBP23.09■■□□□ 1.29
UBXN4-202ENST00000415164 RAVER2Q9HCJ3 691 aaKnown RBP23.09■■□□□ 1.29
UBXN4-202ENST00000415164 TMEM39AQ9NV64 488 aa23.09■■□□□ 1.29
UBXN4-202ENST00000415164 RIPK3Q9Y572 518 aa23.09■■□□□ 1.29
UBXN4-202ENST00000415164 ITGB8P26012 769 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 SBK1Q52WX2 424 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 KBTBD3Q8NAB2 608 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 PRPF38AQ8NAV1 312 aaKnown RBP23.08■■□□□ 1.29
UBXN4-202ENST00000415164 APPBP2Q92624 585 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 CHMP4CQ96CF2 233 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 STARD7Q9NQZ5 370 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 NYAP2Q9P242 653 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 FAM184BQ9ULE4 1060 aa23.08■■□□□ 1.29
UBXN4-202ENST00000415164 PARP14Q460N5 1801 aa23.08■■□□□ 1.28
UBXN4-202ENST00000415164 RNF113AO15541 343 aaKnown RBP23.07■■□□□ 1.28
UBXN4-202ENST00000415164 GPAA1O43292 621 aa23.07■■□□□ 1.28
UBXN4-202ENST00000415164 LRRC47Q8N1G4 583 aaKnown RBP23.07■■□□□ 1.28
UBXN4-202ENST00000415164 ANKRD35Q8N283 1001 aa23.07■■□□□ 1.28
UBXN4-202ENST00000415164 SEMA6BQ9H3T3 888 aa23.07■■□□□ 1.28
UBXN4-202ENST00000415164 MYH7P12883 1935 aa23.07■■□□□ 1.28
UBXN4-202ENST00000415164 SYNRGQ9UMZ2 1314 aa23.07■■□□□ 1.28
UBXN4-202ENST00000415164 UNC80Q8N2C7 3258 aa23.06■■□□□ 1.28
UBXN4-202ENST00000415164 M0R2C6 588 aa23.06■■□□□ 1.28
UBXN4-202ENST00000415164 ACLYP53396 1101 aa23.06■■□□□ 1.28
UBXN4-202ENST00000415164 MYLIPQ8WY64 445 aa23.06■■□□□ 1.28
UBXN4-202ENST00000415164 VTI1AQ96AJ9 217 aa23.06■■□□□ 1.28
UBXN4-202ENST00000415164 COL25A1Q9BXS0 654 aaPredicted RBP23.06■■□□□ 1.28
UBXN4-202ENST00000415164 EPB41L4AQ9HCS5 686 aaPredicted RBP23.06■■□□□ 1.28
UBXN4-202ENST00000415164 HOMER2Q9NSB8 354 aa23.06■■□□□ 1.28
UBXN4-202ENST00000415164 ZNFX1Q9P2E3 1918 aaKnown RBP23.06■■□□□ 1.28
UBXN4-202ENST00000415164 DCDC2CA8MYV0 355 aa23.05■■□□□ 1.28
UBXN4-202ENST00000415164 ADAMTS4O75173 837 aa23.05■■□□□ 1.28
UBXN4-202ENST00000415164 SMAD3P84022 425 aaKnown RBP23.05■■□□□ 1.28
UBXN4-202ENST00000415164 FPGSQ05932 587 aa23.05■■□□□ 1.28
UBXN4-202ENST00000415164 GIMAP6Q6P9H5 292 aa23.05■■□□□ 1.28
UBXN4-202ENST00000415164 NUP133Q8WUM0 1156 aa23.05■■□□□ 1.28
UBXN4-202ENST00000415164 ZNF287Q9HBT7 754 aa23.05■■□□□ 1.28
UBXN4-202ENST00000415164 ROBO3Q96MS0 1386 aa23.04■■□□□ 1.28
UBXN4-202ENST00000415164 SNAI1O95863 264 aaPredicted RBP23.04■■□□□ 1.28
UBXN4-202ENST00000415164 GNAT2P19087 354 aa23.04■■□□□ 1.28
UBXN4-202ENST00000415164 EPHB4P54760 987 aa23.04■■□□□ 1.28
UBXN4-202ENST00000415164 IKQ13123 557 aaPredicted RBP23.04■■□□□ 1.28
UBXN4-202ENST00000415164 KCNA10Q16322 511 aa23.04■■□□□ 1.28
UBXN4-202ENST00000415164 MAFAQ8NHW3 353 aaPredicted RBP23.04■■□□□ 1.28
UBXN4-202ENST00000415164 CEP95Q96GE4 821 aa23.04■■□□□ 1.28
UBXN4-202ENST00000415164 PLXNA1Q9UIW2 1896 aa23.04■■□□□ 1.28
UBXN4-202ENST00000415164 SYNGAP1Q96PV0 1343 aa23.04■■□□□ 1.28
UBXN4-202ENST00000415164 MYADML2A6NDP7 307 aa23.03■■□□□ 1.28
UBXN4-202ENST00000415164 ZFYP08048 801 aaPredicted RBP23.03■■□□□ 1.28
UBXN4-202ENST00000415164 C6orf222P0C671 652 aaPredicted RBP23.03■■□□□ 1.28
UBXN4-202ENST00000415164 TSPY3P0CV98 308 aa23.03■■□□□ 1.28
UBXN4-202ENST00000415164 TSPY8P0CW00 308 aa23.03■■□□□ 1.28
UBXN4-202ENST00000415164 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
UBXN4-202ENST00000415164 TSEN34Q9BSV6 310 aaKnown RBP23.03■■□□□ 1.28
UBXN4-202ENST00000415164 TTYH1Q9H313 450 aaPredicted RBP23.03■■□□□ 1.28
UBXN4-202ENST00000415164 FEM1BQ9UK73 627 aa23.03■■□□□ 1.28
UBXN4-202ENST00000415164 SMCHD1A6NHR9 2005 aa23.03■■□□□ 1.28
UBXN4-202ENST00000415164 KIAA0355O15063 1070 aa23.02■■□□□ 1.28
UBXN4-202ENST00000415164 TTLL1O95922 423 aa23.02■■□□□ 1.28
UBXN4-202ENST00000415164 FOSL2P15408 326 aa23.02■■□□□ 1.28
UBXN4-202ENST00000415164 IRX5P78411 483 aaPredicted RBP23.02■■□□□ 1.28
UBXN4-202ENST00000415164 FAAP100Q0VG06 881 aa23.02■■□□□ 1.28
UBXN4-202ENST00000415164 ACVR2BQ13705 512 aa23.02■■□□□ 1.28
UBXN4-202ENST00000415164 GLT1D1Q96MS3 346 aa23.02■■□□□ 1.28
UBXN4-202ENST00000415164 SPC25Q9HBM1 224 aa23.02■■□□□ 1.28
UBXN4-202ENST00000415164 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.02■■□□□ 1.28
UBXN4-202ENST00000415164 IGKV6D-41A0A0C4DH26 115 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 MOXD2PA6NHM9 499 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 LRRFIP1Q32MZ4 808 aaKnown RBP23.01■■□□□ 1.27
UBXN4-202ENST00000415164 SLFN13Q68D06 897 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 IFNL3Q8IZI9 196 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 SEC62Q99442 399 aaKnown RBP23.01■■□□□ 1.27
UBXN4-202ENST00000415164 NACAP1Q9BZK3 213 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 SLC38A10Q9HBR0 1119 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 MTMR4Q9NYA4 1195 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 FBXO40Q9UH90 709 aa23.01■■□□□ 1.27
UBXN4-202ENST00000415164 DNAJC25-GNG10A0A024R161 153 aa23■■□□□ 1.27
UBXN4-202ENST00000415164 PATL2C9JE40 543 aaKnown RBP23■■□□□ 1.27
UBXN4-202ENST00000415164 TMEM232C9JQI7 657 aa23■■□□□ 1.27
UBXN4-202ENST00000415164 DUSP11O75319 330 aaKnown RBP23■■□□□ 1.27
UBXN4-202ENST00000415164 BMP3P12645 472 aa23■■□□□ 1.27
UBXN4-202ENST00000415164 MAMDC4Q6UXC1 1216 aa23■■□□□ 1.27
UBXN4-202ENST00000415164 NOL8Q76FK4 1167 aaKnown RBP23■■□□□ 1.27
UBXN4-202ENST00000415164 FSD1Q9BTV5 496 aa23■■□□□ 1.27
UBXN4-202ENST00000415164 NAPBQ9H115 298 aa23■■□□□ 1.27
UBXN4-202ENST00000415164 ATP2A1O14983 1001 aa22.99■■□□□ 1.27
UBXN4-202ENST00000415164 SLC3A2P08195 630 aaKnown RBP22.99■■□□□ 1.27
UBXN4-202ENST00000415164 PDE4BQ07343 736 aa22.99■■□□□ 1.27
UBXN4-202ENST00000415164 CCDC144BQ3MJ40 725 aa22.99■■□□□ 1.27
UBXN4-202ENST00000415164 ARMCX2Q7L311 632 aa22.99■■□□□ 1.27
UBXN4-202ENST00000415164 KLHDC9Q8NEP7 349 aa22.99■■□□□ 1.27
UBXN4-202ENST00000415164 CHST13Q8NET6 341 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms