RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TNKSO95271 1327 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 FCER1AP12319 257 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 ZKSCAN1P17029 563 aaPredicted RBP17.24■□□□□ 0.35
CHD1-202ENST00000414220 MAP2K5Q13163 448 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 KCTD2Q14681 263 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 GPATCH4Q5T3I0 446 aaKnown RBP17.24■□□□□ 0.35
CHD1-202ENST00000414220 POTEEQ6S8J3 1075 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 KCTD1Q719H9 257 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 ABRAQ8N0Z2 381 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 CPXCR1Q8N123 301 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
CHD1-202ENST00000414220 IFIT3O14879 490 aaKnown RBP17.23■□□□□ 0.35
CHD1-202ENST00000414220 ATP2A1O14983 1001 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 EIF5BO60841 1220 aaKnown RBP17.23■□□□□ 0.35
CHD1-202ENST00000414220 REC8O95072 547 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 HMGCRP04035 888 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 CAPN2P17655 700 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 MORN1Q5T089 497 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 CREB3L3Q68CJ9 461 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 SNRNP48Q6IEG0 339 aaKnown RBP17.23■□□□□ 0.35
CHD1-202ENST00000414220 NKX2-3Q8TAU0 364 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 APBA2Q99767 749 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 FBXO40Q9UH90 709 aa17.23■□□□□ 0.35
CHD1-202ENST00000414220 MYH4Q9Y623 1939 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 SLC27A2O14975 620 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 PDHBP11177 359 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 ELNP15502 786 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 MCM5P33992 734 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 SOX10P56693 466 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 GRB14Q14449 540 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 KRT32Q14532 448 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 NECTIN1Q15223 517 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 ENAHQ8N8S7 591 aaPredicted RBP17.22■□□□□ 0.35
CHD1-202ENST00000414220 MMP19Q99542 508 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 MTA3Q9BTC8 594 aa17.22■□□□□ 0.35
CHD1-202ENST00000414220 ZNF214Q9UL59 606 aaPredicted RBP17.22■□□□□ 0.35
CHD1-202ENST00000414220 MGAMO43451 1857 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 MYCP01106 439 aaPredicted RBP17.21■□□□□ 0.35
CHD1-202ENST00000414220 INHAP05111 366 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 ZNF543Q08ER8 600 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 WTAPQ15007 396 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 ASPRV1Q53RT3 343 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 MFSD14CQ5VZR4 134 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 BTNL9Q6UXG8 535 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 TMTC2Q8N394 836 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 CHST13Q8NET6 341 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 REPS2Q8NFH8 660 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
CHD1-202ENST00000414220 GPCPD1Q9NPB8 672 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 PRR12Q9ULL5 1215 aa17.21■□□□□ 0.35
CHD1-202ENST00000414220 LAMA4Q16363 1823 aa17.2■□□□□ 0.34
CHD1-202ENST00000414220 HOXC6P09630 235 aa17.2■□□□□ 0.34
CHD1-202ENST00000414220 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
CHD1-202ENST00000414220 ADORA2AP29274 412 aa17.2■□□□□ 0.34
CHD1-202ENST00000414220 CYB5R4Q7L1T6 521 aa17.2■□□□□ 0.34
CHD1-202ENST00000414220 USP6NLQ92738 828 aa17.2■□□□□ 0.34
CHD1-202ENST00000414220 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
CHD1-202ENST00000414220 HMX1Q9NP08 348 aaPredicted RBP17.2■□□□□ 0.34
CHD1-202ENST00000414220 FRMPD2Q68DX3 1309 aaPredicted RBP17.2■□□□□ 0.34
CHD1-202ENST00000414220 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
CHD1-202ENST00000414220 SNHG28P0DPA3 235 aa17.19■□□□□ 0.34
CHD1-202ENST00000414220 CCL5P13501 91 aa17.19■□□□□ 0.34
CHD1-202ENST00000414220 TMEM67Q5HYA8 995 aa17.19■□□□□ 0.34
CHD1-202ENST00000414220 CATIPQ7Z7H3 387 aa17.19■□□□□ 0.34
CHD1-202ENST00000414220 ANKRD35Q8N283 1001 aa17.19■□□□□ 0.34
CHD1-202ENST00000414220 TMEM87BQ96K49 555 aa17.19■□□□□ 0.34
CHD1-202ENST00000414220 RPTORQ8N122 1335 aa17.19■□□□□ 0.34
CHD1-202ENST00000414220 DHX16O60231 1041 aaKnown RBP17.18■□□□□ 0.34
CHD1-202ENST00000414220 HMGB1P09429 215 aaKnown RBP17.18■□□□□ 0.34
CHD1-202ENST00000414220 SLC16A2P36021 539 aa17.18■□□□□ 0.34
CHD1-202ENST00000414220 SEC23AQ15436 765 aa17.18■□□□□ 0.34
CHD1-202ENST00000414220 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
CHD1-202ENST00000414220 MB21D2Q8IYB1 491 aaPredicted RBP17.18■□□□□ 0.34
CHD1-202ENST00000414220 NEK1Q96PY6 1258 aa17.18■□□□□ 0.34
CHD1-202ENST00000414220 ACAD9Q9H845 621 aa17.18■□□□□ 0.34
CHD1-202ENST00000414220 DIS3Q9Y2L1 958 aaKnown RBP17.18■□□□□ 0.34
CHD1-202ENST00000414220 ZSWIM8A7E2V4 1837 aa17.18■□□□□ 0.34
CHD1-202ENST00000414220 PRC1O43663 620 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 GJB1P08034 283 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 ALAS1P13196 640 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 RGS19P49795 217 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 MTFR1Q15390 333 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 NFXL1Q6ZNB6 911 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 STOX1Q6ZVD7 989 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 TRIB2Q92519 343 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 RANBP17Q9H2T7 1088 aaKnown RBP17.17■□□□□ 0.34
CHD1-202ENST00000414220 CCPG1Q9ULG6 757 aa17.17■□□□□ 0.34
CHD1-202ENST00000414220 CCDC69A6NI79 296 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 ICAM1P05362 532 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 GOLGA8HP0CJ92 632 aa17.16■□□□□ 0.34
CHD1-202ENST00000414220 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
CHD1-202ENST00000414220 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms