RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 FBXO28Q9NVF7 368 aa19.92■□□□□ 0.78
SCAMP4-204ENST00000414057 PCDH10Q9P2E7 1040 aa19.92■□□□□ 0.78
SCAMP4-204ENST00000414057 IGKV6D-41A0A0C4DH26 115 aa19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 PRDM1O75626 825 aa19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 CYP2C19P33261 490 aa19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 STAT3P40763 770 aa19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 RNF20Q5VTR2 975 aa19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 ZNF589Q86UQ0 364 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 DSCC1Q9BVC3 393 aa19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 MTMR4Q9NYA4 1195 aa19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 DDX20Q9UHI6 824 aaKnown RBP19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 CTDP1Q9Y5B0 961 aaPredicted RBP19.91■□□□□ 0.78
SCAMP4-204ENST00000414057 MNX1P50219 401 aaPredicted RBP19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 PTH1RQ03431 593 aa19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 KCTD2Q14681 263 aa19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 PRPF38AQ8NAV1 312 aaKnown RBP19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 NEDD1Q8NHV4 660 aa19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 KCNB2Q92953 911 aa19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 SNX21Q969T3 373 aa19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 CEP95Q96GE4 821 aa19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 U3KPZ7 1027 aaPredicted RBP19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 A0A0G2JMZ2 1700 aa19.9■□□□□ 0.78
SCAMP4-204ENST00000414057 NDUFB10O96000 172 aa19.89■□□□□ 0.77
SCAMP4-204ENST00000414057 MMP19Q99542 508 aa19.89■□□□□ 0.77
SCAMP4-204ENST00000414057 COBLO75128 1261 aa19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 ZBED4O75132 1171 aa19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 TFAP4Q01664 338 aa19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 NECTIN1Q15223 517 aa19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 GMCL1P1Q8NEA9 526 aa19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 TEX13BQ9BXU2 312 aa19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 ZNF214Q9UL59 606 aaPredicted RBP19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 RBM8AQ9Y5S9 174 aaKnown RBP19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 PLIN4Q96Q06 1357 aa19.88■□□□□ 0.77
SCAMP4-204ENST00000414057 ZNF236Q9UL36 1845 aa19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 IGHA2P01877 340 aa19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 CYBAP13498 195 aa19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 C7orf61Q8IZ16 206 aa19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 MAML3Q96JK9 1138 aa19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 NUP88Q99567 741 aaPredicted RBP19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 FEM1BQ9UK73 627 aa19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 DIS3Q9Y2L1 958 aaKnown RBP19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 RLFQ13129 1914 aa19.87■□□□□ 0.77
SCAMP4-204ENST00000414057 TSPY2A6NKD2 308 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 FDX1P10109 184 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 COL6A1P12109 1028 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 FXR1P51114 621 aaKnown RBP eCLIP19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 ARRDC4Q8NCT1 418 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 REPS2Q8NFH8 660 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 RBM27Q9P2N5 1060 aaKnown RBP19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 NRBP1Q9UHY1 535 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 GREB1LQ9C091 1923 aaPredicted RBP19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 A0A1W2PPC1 479 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 SEPT4O43236 478 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 ST18O60284 1047 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 FAM47AQ5JRC9 791 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 CCDC129Q6ZRS4 1044 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 HSCBQ8IWL3 235 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 ANAPC4Q9UJX5 808 aa19.86■□□□□ 0.77
SCAMP4-204ENST00000414057 DNM1LO00429 736 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 ATP2A1O14983 1001 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 HSPD1P10809 573 aaKnown RBP19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 BMP3P12645 472 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 ALX1Q15699 326 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 TSGA10IPQ3SY00 556 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 SLFN13Q68D06 897 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 SNRNP48Q6IEG0 339 aaKnown RBP19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 LRRC47Q8N1G4 583 aaKnown RBP19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 KIFC2Q96AC6 838 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 CTNNA3Q9UI47 895 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 STX8Q9UNK0 236 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 SNX14Q9Y5W7 946 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 PFASO15067 1338 aa19.85■□□□□ 0.77
SCAMP4-204ENST00000414057 OAZ1P54368 228 aa19.84■□□□□ 0.77
SCAMP4-204ENST00000414057 KRT32Q14532 448 aa19.84■□□□□ 0.77
SCAMP4-204ENST00000414057 CREB3L3Q68CJ9 461 aa19.84■□□□□ 0.77
SCAMP4-204ENST00000414057 TRPV1Q8NER1 839 aa19.84■□□□□ 0.77
SCAMP4-204ENST00000414057 TM6SF1Q9BZW5 370 aa19.84■□□□□ 0.77
SCAMP4-204ENST00000414057 PRO3102Q9H379 93 aa19.84■□□□□ 0.77
SCAMP4-204ENST00000414057 ZNF792Q3KQV3 632 aa19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 CPXCR1Q8N123 301 aa19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 CHURC1Q8WUH1 139 aa19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 DDX11Q96FC9 970 aa19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 TINF2Q9BSI4 451 aa19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 SENP6Q9GZR1 1112 aaPredicted RBP19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 FBXO40Q9UH90 709 aa19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 ISY1Q9ULR0 285 aaKnown RBP19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.83■□□□□ 0.76
SCAMP4-204ENST00000414057 ZMYM6O95789 1325 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 SLC27A2O14975 620 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 RANBP6O60518 1105 aaKnown RBP19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 PGK2P07205 417 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 PSMA5P28066 241 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 SLC1A4P43007 532 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 MCM2P49736 904 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 STAT2P52630 851 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 CTDSPL2Q05D32 466 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 VPS53Q5VIR6 699 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 FAM160B2Q86V87 743 aa19.82■□□□□ 0.76
SCAMP4-204ENST00000414057 MSL3Q8N5Y2 521 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms