RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 CLTBP09497 229 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 EPHB4P54760 987 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 MSL3Q8N5Y2 521 aaKnown RBP17.14■□□□□ 0.33
SNHG17-201ENST00000413755 PRPF38AQ8NAV1 312 aaKnown RBP17.14■□□□□ 0.33
SNHG17-201ENST00000413755 KLHDC9Q8NEP7 349 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 MKL1Q969V6 931 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 CDX2Q99626 313 aaPredicted RBP17.14■□□□□ 0.33
SNHG17-201ENST00000413755 SEMA6BQ9H3T3 888 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
SNHG17-201ENST00000413755 M0R2C6 588 aa17.13■□□□□ 0.33
SNHG17-201ENST00000413755 KIAA0355O15063 1070 aa17.13■□□□□ 0.33
SNHG17-201ENST00000413755 GPAA1O43292 621 aa17.13■□□□□ 0.33
SNHG17-201ENST00000413755 PRDM1O75626 825 aa17.13■□□□□ 0.33
SNHG17-201ENST00000413755 SMAD3P84022 425 aaKnown RBP17.13■□□□□ 0.33
SNHG17-201ENST00000413755 CCSAPQ6IQ19 270 aaPredicted RBP17.13■□□□□ 0.33
SNHG17-201ENST00000413755 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.13■□□□□ 0.332e-19■□□□□ 8.5
SNHG17-201ENST00000413755 TSEN34Q9BSV6 310 aaKnown RBP17.13■□□□□ 0.33
SNHG17-201ENST00000413755 TTYH1Q9H313 450 aaPredicted RBP17.13■□□□□ 0.33
SNHG17-201ENST00000413755 DNAH12Q6ZR08 3092 aa17.13■□□□□ 0.33
SNHG17-201ENST00000413755 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
SNHG17-201ENST00000413755 GREB1LQ9C091 1923 aaPredicted RBP17.12■□□□□ 0.33
SNHG17-201ENST00000413755 PQBP1O60828 265 aaKnown RBP17.12■□□□□ 0.33
SNHG17-201ENST00000413755 IRX5P78411 483 aaPredicted RBP17.12■□□□□ 0.33
SNHG17-201ENST00000413755 FAAP100Q0VG06 881 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNHG17-201ENST00000413755 CPXCR1Q8N123 301 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 FGD4Q96M96 766 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 COL25A1Q9BXS0 654 aaPredicted RBP17.12■□□□□ 0.33
SNHG17-201ENST00000413755 SLC38A10Q9HBR0 1119 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 RAVER2Q9HCJ3 691 aaKnown RBP17.12■□□□□ 0.33
SNHG17-201ENST00000413755 MTMR4Q9NYA4 1195 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 FAM184BQ9ULE4 1060 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 SYNRGQ9UMZ2 1314 aa17.12■□□□□ 0.33
SNHG17-201ENST00000413755 MYADML2A6NDP7 307 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 PATL2C9JE40 543 aaKnown RBP17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ZBED4O75132 1171 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ZFYP08048 801 aaPredicted RBP17.11■□□□□ 0.33
SNHG17-201ENST00000413755 GNAT2P19087 354 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 SLC4A3P48751 1232 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ACLYP53396 1101 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 KCNA10Q16322 511 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
SNHG17-201ENST00000413755 IFNL3Q8IZI9 196 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ZNF444Q8N0Y2 327 aaPredicted RBP17.11■□□□□ 0.33
SNHG17-201ENST00000413755 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 TOX2Q96NM4 488 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 STARD7Q9NQZ5 370 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ZHX1Q9UKY1 873 aaPredicted RBP17.11■□□□□ 0.33
SNHG17-201ENST00000413755 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
SNHG17-201ENST00000413755 MYH8P13535 1937 aa17.11■□□□□ 0.33
SNHG17-201ENST00000413755 ADCY6O43306 1168 aa17.1■□□□□ 0.33
SNHG17-201ENST00000413755 RAG1P15918 1043 aa17.1■□□□□ 0.33
SNHG17-201ENST00000413755 TDO2P48775 406 aa17.1■□□□□ 0.33
SNHG17-201ENST00000413755 ACVR2BQ13705 512 aa17.1■□□□□ 0.33
SNHG17-201ENST00000413755 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
SNHG17-201ENST00000413755 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
SNHG17-201ENST00000413755 FEM1BQ9UK73 627 aa17.1■□□□□ 0.33
SNHG17-201ENST00000413755 SYNPO2Q9UMS6 1093 aa17.1■□□□□ 0.33
SNHG17-201ENST00000413755 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 DUSP11O75319 330 aaKnown RBP17.09■□□□□ 0.33
SNHG17-201ENST00000413755 TTLL1O95922 423 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 APPP05067 770 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
SNHG17-201ENST00000413755 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
SNHG17-201ENST00000413755 ZNF287Q9HBT7 754 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
SNHG17-201ENST00000413755 ZNFX1Q9P2E3 1918 aaKnown RBP17.09■□□□□ 0.33
SNHG17-201ENST00000413755 SMCHD1A6NHR9 2005 aa17.09■□□□□ 0.33
SNHG17-201ENST00000413755 CST5P28325 142 aaPredicted RBP17.08■□□□□ 0.32
SNHG17-201ENST00000413755 CDK7P50613 346 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 OAZ1P54368 228 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 FPGSQ05932 587 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 CHST13Q8NET6 341 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 MYLIPQ8WY64 445 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 KATNBL1Q9H079 304 aa17.08■□□□□ 0.32
SNHG17-201ENST00000413755 PLIN4Q96Q06 1357 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 DCDC2CA8MYV0 355 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 BMP3P12645 472 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 ARMCX2Q7L311 632 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 PI4K2BQ8TCG2 481 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 UPF3AQ9H1J1 476 aaKnown RBP17.07■□□□□ 0.32
SNHG17-201ENST00000413755 ABHD16BQ9H3Z7 469 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 FBXO40Q9UH90 709 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 TBX21Q9UL17 535 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
SNHG17-201ENST00000413755 MYH7P12883 1935 aa17.07■□□□□ 0.32
SNHG17-201ENST00000413755 ZNF536O15090 1300 aa17.06■□□□□ 0.32
SNHG17-201ENST00000413755 ELP1O95163 1332 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms