RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 GPR142Q7Z601 462 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 TRIB2Q92519 343 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 LPAR1Q92633 364 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 USP6NLQ92738 828 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 COA7Q96BR5 231 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 ATG4CQ96DT6 458 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 NACAP1Q9BZK3 213 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 UNC93B1Q9H1C4 597 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 NYAP2Q9P242 653 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 ANAPC4Q9UJX5 808 aa10.16□□□□□ -0.78
HERPUD2-203ENST00000413517 ZMYM6O95789 1325 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 WDR46O15213 610 aaKnown RBP10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 NDUFB10O96000 172 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 FGRP09769 529 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 CCL5P13501 91 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 MAPK4P31152 587 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 HAND2P61296 217 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 COG2Q14746 738 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 CCL14Q16627 93 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 CWC27Q6UX04 472 aaKnown RBP10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 NBPF11Q86T75 865 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 TICAM2Q86XR7 235 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 TBC1D10CQ8IV04 446 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 LRRC47Q8N1G4 583 aaKnown RBP10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 SLAIN1Q8ND83 568 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 NEDD1Q8NHV4 660 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 PXYLP1Q8TE99 480 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 GTF3C2Q8WUA4 911 aaPredicted RBP10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 MOV10L1Q9BXT6 1211 aaKnown RBP10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 GPCPD1Q9NPB8 672 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 IL17RBQ9NRM6 502 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 MTMR4Q9NYA4 1195 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 CLIP2Q9UDT6 1046 aa10.15□□□□□ -0.78
HERPUD2-203ENST00000413517 MYH6P13533 1939 aa10.15□□□□□ -0.79
HERPUD2-203ENST00000413517 F5H6K3 240 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 ORC4O43929 436 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 FLOT1O75955 427 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 CYP2B6P20813 491 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 MFAP1P55081 439 aaKnown RBP10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 TFAP4Q01664 338 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 PDE4BQ07343 736 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 KLRC3Q07444 240 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 PLEKHH3Q7Z736 793 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 ZNF444Q8N0Y2 327 aaPredicted RBP10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 REPS2Q8NFH8 660 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 DDX12PQ92771 950 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 SH2D4AQ9H788 454 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 FLRT1Q9NZU1 646 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 ADAMTS5Q9UNA0 930 aa10.14□□□□□ -0.79
HERPUD2-203ENST00000413517 TSPY3P0CV98 308 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 TSPY8P0CW00 308 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 TMEM132BQ14DG7 1078 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 MKL1Q969V6 931 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 CHMP4CQ96CF2 233 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 SPATC1LQ9H0A9 340 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 RNF208Q9H0X6 261 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 GZF1Q9H116 711 aaPredicted RBP10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 DIAPH3Q9NSV4 1193 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 BIN2Q9UBW5 565 aaPredicted RBP10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 ZNF214Q9UL59 606 aaPredicted RBP10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 PPP1R9AQ9ULJ8 1098 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 MTMR7Q9Y216 660 aa10.13□□□□□ -0.79
HERPUD2-203ENST00000413517 BAZ2BQ9UIF8 2168 aaKnown RBP10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 NEDD4P46934 1319 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 VWA5AO00534 786 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 TTLL1O95922 423 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 IGHA2P01877 340 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 HMGCRP04035 888 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 GJB1P08034 283 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 ERCC3P19447 782 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 PTPREP23469 700 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 NOVP48745 357 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 GRB14Q14449 540 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 MAP3K21Q5TCX8 1036 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 WDR78Q5VTH9 848 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 UBE2Q1Q7Z7E8 422 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 NPLOC4Q8TAT6 608 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 SOCS4Q8WXH5 440 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 APBA2Q99767 749 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 ZNF287Q9HBT7 754 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 PAK6Q9NQU5 681 aaPredicted RBP10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 HOXC10Q9NYD6 342 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
HERPUD2-203ENST00000413517 SLC15A5A6NIM6 579 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 TSPY2A6NKD2 308 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 SLC3A2P08195 630 aaKnown RBP10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 XRCC5P13010 732 aaKnown RBP10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 CHMLP26374 656 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 SSTR3P32745 418 aaPredicted RBP10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 GJA8P48165 433 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 UBXN2AP68543 259 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 CCNA1P78396 465 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 MDM2Q00987 491 aaPredicted RBP10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 PLS1Q14651 629 aa10.11□□□□□ -0.79
HERPUD2-203ENST00000413517 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms