RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 FHOD1Q9Y613 1164 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 CNTNAP4Q9C0A0 1308 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 BLACEA4D250 179 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 DLX3O60479 287 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 SNRPB2P08579 225 aaKnown RBP6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 FAM87AP0C7U9 286 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 SDSP20132 328 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 EVA1CP58658 441 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 ADGRE1Q14246 886 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 DPY19L1Q2PZI1 675 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 SFRP5Q5T4F7 317 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 BEND4Q6ZU67 534 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 FAM20CQ8IXL6 584 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 SYTL5Q8TDW5 730 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 FAM126AQ9BYI3 521 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 CAAP1Q9H8G2 361 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 DDX56Q9NY93 547 aaKnown RBP6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 KLHL42Q9P2K6 505 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 SFMBT1Q9UHJ3 866 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 KCNH3Q9ULD8 1083 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 MINPP1Q9UNW1 487 aa6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 GPR55Q9Y2T6 319 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P31-201ENST00000413333 DNAJC25-GNG10A0A024R161 153 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 A0A087X0B3 334 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 MARCH6O60337 910 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 CAPNS1P04632 268 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 SOX5P35711 763 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 STAT3P40763 770 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 ECI1P42126 302 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 JAMLQ86YT9 394 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 SLC7A14Q8TBB6 771 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 KCTD13Q8WZ19 329 aa6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 SCARF2Q96GP6 870 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 ASCC2Q9H1I8 757 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 PRDM5Q9NQX1 630 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 SF3B6Q9Y3B4 125 aaKnown RBP6.64□□□□□ -1.35
HMGB3P31-201ENST00000413333 PRAMEF1O95521 474 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 HOXC12P31275 282 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 NFKB2Q00653 900 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 AMPD2Q01433 879 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 PRSS53Q2L4Q9 553 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 USP53Q70EK8 1073 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 LRRTM3Q86VH5 581 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 TXNRD3Q86VQ6 643 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 DZIP1LQ8IYY4 767 aaKnown RBP6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 NKX2-4Q9H2Z4 354 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 METTL14Q9HCE5 456 aaKnown RBP6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 CHST7Q9NS84 486 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
HMGB3P31-201ENST00000413333 H0Y8X5 98 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 DHX15O43143 795 aaKnown RBP6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 SIGLEC6O43699 453 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 C6orf222P0C671 652 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 ITIH2P19823 946 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 GFRA1P56159 465 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 GABREP78334 506 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 NMIQ13287 307 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 GRB10Q13322 594 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 CLEC16AQ2KHT3 1053 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 PLEKHG6Q3KR16 790 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 CWF19L1Q69YN2 538 aaKnown RBP6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 BRAPQ7Z569 592 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 PRPF38AQ8NAV1 312 aaKnown RBP6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 DTWD2Q8NBA8 298 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 TMEM145Q8NBT3 493 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 STAG1Q8WVM7 1258 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 Q96M66 194 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 TBC1D32Q96NH3 1257 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 SLC52A2Q9HAB3 445 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 HOMER2Q9NSB8 354 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 MAGEC2Q9UBF1 373 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P31-201ENST00000413333 GSG1L2A8MUP6 293 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 PRR33A8MZF0 331 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 WIPF1O43516 503 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 OPA1O60313 960 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 DNAJC8O75937 253 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 CDKN1CP49918 316 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 SCRN1Q12765 414 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 MAP4K2Q12851 820 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 NTRK3Q16288 839 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 GPAT2Q6NUI2 795 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 FGD2Q7Z6J4 655 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 RNF180Q86T96 592 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 FERMT3Q86UX7 667 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 DDX42Q86XP3 938 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 LEO1Q8WVC0 666 aaPredicted RBP6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 PTPRN2Q92932 1015 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 COX4I2Q96KJ9 171 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 CCDC140Q96MF4 163 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 TRIM39Q9HCM9 518 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 CYP26B1Q9NR63 512 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 INTS7Q9NVH2 962 aaKnown RBP6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 GTF2IRD1Q9UHL9 959 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 TRAF6Q9Y4K3 522 aa6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 TNPO3Q9Y5L0 923 aaKnown RBP6.61□□□□□ -1.35
HMGB3P31-201ENST00000413333 SHISA3A0PJX4 238 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms