RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 USP17L12C9JPN9 530 aa22.59■■□□□ 1.21
TNRC18-204ENST00000413081 USP17L21D6R901 530 aa22.59■■□□□ 1.21
TNRC18-204ENST00000413081 TIMP1P01033 207 aa22.59■■□□□ 1.21
TNRC18-204ENST00000413081 ADD2P35612 726 aa22.59■■□□□ 1.21
TNRC18-204ENST00000413081 USP38Q8NB14 1042 aa22.59■■□□□ 1.21
TNRC18-204ENST00000413081 GLT1D1Q96MS3 346 aa22.59■■□□□ 1.21
TNRC18-204ENST00000413081 GAS2L1Q99501 681 aaPredicted RBP22.59■■□□□ 1.21
TNRC18-204ENST00000413081 SYNGAP1Q96PV0 1343 aa22.58■■□□□ 1.21
TNRC18-204ENST00000413081 KCNA10Q16322 511 aa22.58■■□□□ 1.21
TNRC18-204ENST00000413081 CCDC129Q6ZRS4 1044 aa22.58■■□□□ 1.21
TNRC18-204ENST00000413081 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.58■■□□□ 1.218e-10■■■□□ 15.9
TNRC18-204ENST00000413081 TEX13BQ9BXU2 312 aa22.58■■□□□ 1.21
TNRC18-204ENST00000413081 TTC28Q96AY4 2481 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 SMIM22K7EJ46 135 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 PPIGQ13427 754 aaKnown RBP eCLIP22.57■■□□□ 1.27e-7■□□□□ 8.6
TNRC18-204ENST00000413081 SLFNL1Q499Z3 407 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 SNRNP48Q6IEG0 339 aaKnown RBP22.57■■□□□ 1.2
TNRC18-204ENST00000413081 MFSD5Q6N075 450 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 REPS2Q8NFH8 660 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 VTI1AQ96AJ9 217 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 SLF1Q9BQI6 1058 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 SPC25Q9HBM1 224 aa22.57■■□□□ 1.2
TNRC18-204ENST00000413081 CTDP1Q9Y5B0 961 aaPredicted RBP22.57■■□□□ 1.2
TNRC18-204ENST00000413081 TNFRSF10AO00220 468 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 SLC4A3P48751 1232 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 PCSK9Q8NBP7 692 aaKnown RBP22.56■■□□□ 1.2
TNRC18-204ENST00000413081 KLHDC9Q8NEP7 349 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 BOLA2Q9H3K6 86 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 TBX21Q9UL17 535 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 SLC4A4Q9Y6R1 1079 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 MYH7P12883 1935 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 ELP1O95163 1332 aa22.56■■□□□ 1.2
TNRC18-204ENST00000413081 DUSP11O75319 330 aaKnown RBP22.55■■□□□ 1.2
TNRC18-204ENST00000413081 SNAI1O95863 264 aaPredicted RBP22.55■■□□□ 1.2
TNRC18-204ENST00000413081 C6orf222P0C671 652 aaPredicted RBP22.55■■□□□ 1.2
TNRC18-204ENST00000413081 PPM1EQ8WY54 764 aa22.55■■□□□ 1.2
TNRC18-204ENST00000413081 HMMRO75330 724 aa22.54■■□□□ 1.2
TNRC18-204ENST00000413081 CCSAPQ6IQ19 270 aaPredicted RBP22.54■■□□□ 1.2
TNRC18-204ENST00000413081 MAMDC4Q6UXC1 1216 aa22.54■■□□□ 1.2
TNRC18-204ENST00000413081 TMEM199Q8N511 208 aa22.54■■□□□ 1.2
TNRC18-204ENST00000413081 NUP88Q99567 741 aaPredicted RBP22.54■■□□□ 1.2
TNRC18-204ENST00000413081 MYADML2A6NDP7 307 aa22.53■■□□□ 1.2
TNRC18-204ENST00000413081 TLR3O15455 904 aaKnown RBP22.53■■□□□ 1.2
TNRC18-204ENST00000413081 CST5P28325 142 aaPredicted RBP22.53■■□□□ 1.2
TNRC18-204ENST00000413081 ACVR2BQ13705 512 aa22.53■■□□□ 1.2
TNRC18-204ENST00000413081 TMEM240Q5SV17 173 aa22.53■■□□□ 1.2
TNRC18-204ENST00000413081 CTR9Q6PD62 1173 aa22.53■■□□□ 1.2
TNRC18-204ENST00000413081 CPXCR1Q8N123 301 aa22.53■■□□□ 1.2
TNRC18-204ENST00000413081 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
TNRC18-204ENST00000413081 PBX4Q9BYU1 374 aa22.53■■□□□ 1.2
TNRC18-204ENST00000413081 ARPP21Q9UBL0 812 aaPredicted RBP22.53■■□□□ 1.2
TNRC18-204ENST00000413081 A0A0U1RQG5 324 aaPredicted RBP22.52■■□□□ 1.2
TNRC18-204ENST00000413081 ZBED4O75132 1171 aa22.52■■□□□ 1.2
TNRC18-204ENST00000413081 ASGR1P07306 291 aa22.52■■□□□ 1.2
TNRC18-204ENST00000413081 CSF2RAP15509 400 aa22.52■■□□□ 1.2
TNRC18-204ENST00000413081 UBE3CQ15386 1083 aa22.52■■□□□ 1.2
TNRC18-204ENST00000413081 ZSCAN25Q6NSZ9 544 aa22.52■■□□□ 1.2
TNRC18-204ENST00000413081 PSRC1Q6PGN9 363 aaPredicted RBP22.52■■□□□ 1.2
TNRC18-204ENST00000413081 ZNF467Q7Z7K2 595 aaPredicted RBP22.52■■□□□ 1.2
TNRC18-204ENST00000413081 PRPF38AQ8NAV1 312 aaKnown RBP22.52■■□□□ 1.2
TNRC18-204ENST00000413081 PPP1R12CQ9BZL4 782 aa22.52■■□□□ 1.2
TNRC18-204ENST00000413081 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.52■■□□□ 1.2
TNRC18-204ENST00000413081 RIPK3Q9Y572 518 aa22.52■■□□□ 1.2
TNRC18-204ENST00000413081 GREB1LQ9C091 1923 aaPredicted RBP22.51■■□□□ 1.19
TNRC18-204ENST00000413081 DNAJC25-GNG10A0A024R161 153 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 RAB11FIP3O75154 756 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 ATP5JP18859 108 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 COL9A1P20849 921 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 PBX2P40425 430 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 CDK7P50613 346 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 ANKRD35Q8N283 1001 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 HAUS7Q99871 368 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 ABHD16BQ9H3Z7 469 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 PRDM12Q9H4Q4 367 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 MKNK2Q9HBH9 465 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 THEGQ9P2T0 379 aa22.51■■□□□ 1.19
TNRC18-204ENST00000413081 GRXCR1A8MXD5 290 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 F5H6K3 240 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 ARVCFO00192 962 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 ACRP10323 421 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 KLRC3Q07444 240 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 CCDC144BQ3MJ40 725 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 GNASQ5JWF2 1037 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 AKNAD1Q5T1N1 836 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 RPAP2Q8IXW5 612 aaPredicted RBP22.5■■□□□ 1.19
TNRC18-204ENST00000413081 ATXN2LQ8WWM7 1075 aaKnown RBP22.5■■□□□ 1.19
TNRC18-204ENST00000413081 NYAP2Q9P242 653 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 MSRAQ9UJ68 235 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 MCM3APO60318 1980 aa22.5■■□□□ 1.19
TNRC18-204ENST00000413081 ATP2A1O14983 1001 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 NDUFB10O96000 172 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 CHGBP05060 677 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 GJA9P57773 515 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 IRX5P78411 483 aaPredicted RBP22.49■■□□□ 1.19
TNRC18-204ENST00000413081 RAB30Q15771 203 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 ZNF365Q70YC5 407 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 C16orf59Q7L2K0 433 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 STK11IPQ8N1F8 1099 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 KIFC2Q96AC6 838 aa22.49■■□□□ 1.19
TNRC18-204ENST00000413081 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms