RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 KLHDC9Q8NEP7 349 aa16.45■□□□□ 0.22
RAB5A-202ENST00000412966 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
RAB5A-202ENST00000412966 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
RAB5A-202ENST00000412966 TSEN34Q9BSV6 310 aaKnown RBP16.45■□□□□ 0.22
RAB5A-202ENST00000412966 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
RAB5A-202ENST00000412966 DNAJC25-GNG10A0A024R161 153 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 IRX5P78411 483 aaPredicted RBP16.44■□□□□ 0.22
RAB5A-202ENST00000412966 SBK1Q52WX2 424 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 SNRNP48Q6IEG0 339 aaKnown RBP16.44■□□□□ 0.22
RAB5A-202ENST00000412966 CCSAPQ6IQ19 270 aaPredicted RBP16.44■□□□□ 0.22
RAB5A-202ENST00000412966 ANKRD33Q7Z3H0 272 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 STRBPQ96SI9 672 aaKnown RBP16.44■□□□□ 0.22
RAB5A-202ENST00000412966 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 TEX13BQ9BXU2 312 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 TMEM39AQ9NV64 488 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 NYAP2Q9P242 653 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
RAB5A-202ENST00000412966 CNPY2Q9Y2B0 182 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
RAB5A-202ENST00000412966 MYO9BQ13459 2157 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 TMEM265A0A087WTH1 108 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 MYADML2A6NDP7 307 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 F5H6K3 240 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
RAB5A-202ENST00000412966 NDUFB10O96000 172 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 ACLYP53396 1101 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 FPGSQ05932 587 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 KLRC3Q07444 240 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 MSL3Q8N5Y2 521 aaKnown RBP16.43■□□□□ 0.22
RAB5A-202ENST00000412966 TOX2Q96NM4 488 aa16.43■□□□□ 0.22
RAB5A-202ENST00000412966 CHD9Q3L8U1 2897 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 ADCY6O43306 1168 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 FOSL2P15408 326 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 KCNA10Q16322 511 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 ZSCAN25Q6NSZ9 544 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.42■□□□□ 0.22
RAB5A-202ENST00000412966 FGD4Q96M96 766 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 STARD7Q9NQZ5 370 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 ZHX1Q9UKY1 873 aaPredicted RBP16.42■□□□□ 0.22
RAB5A-202ENST00000412966 FAM184BQ9ULE4 1060 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
RAB5A-202ENST00000412966 MOXD2PA6NHM9 499 aa16.41■□□□□ 0.22
RAB5A-202ENST00000412966 ATP2A1O14983 1001 aa16.41■□□□□ 0.22
RAB5A-202ENST00000412966 DUSP11O75319 330 aaKnown RBP16.41■□□□□ 0.22
RAB5A-202ENST00000412966 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
RAB5A-202ENST00000412966 NUP133Q8WUM0 1156 aa16.41■□□□□ 0.22
RAB5A-202ENST00000412966 OSBP2Q969R2 916 aa16.41■□□□□ 0.22
RAB5A-202ENST00000412966 DDX11Q96FC9 970 aa16.41■□□□□ 0.22
RAB5A-202ENST00000412966 LRRCC1Q9C099 1032 aa16.41■□□□□ 0.22
RAB5A-202ENST00000412966 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
RAB5A-202ENST00000412966 TBX21Q9UL17 535 aa16.41■□□□□ 0.22
RAB5A-202ENST00000412966 DCDC2CA8MYV0 355 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 TIMP1P01033 207 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 DNAJB2P25686 324 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 CST5P28325 142 aaPredicted RBP16.4■□□□□ 0.22
RAB5A-202ENST00000412966 CDK7P50613 346 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 ACVR2BQ13705 512 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 GRIN2CQ14957 1233 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 ZNF467Q7Z7K2 595 aaPredicted RBP16.4■□□□□ 0.22
RAB5A-202ENST00000412966 CPXCR1Q8N123 301 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.4■□□□□ 0.223e-9■■■■□ 20.1
RAB5A-202ENST00000412966 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 RAVER2Q9HCJ3 691 aaKnown RBP16.4■□□□□ 0.22
RAB5A-202ENST00000412966 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.4■□□□□ 0.22
RAB5A-202ENST00000412966 CLIP2Q9UDT6 1046 aa16.4■□□□□ 0.22
RAB5A-202ENST00000412966 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.39■□□□□ 0.21
RAB5A-202ENST00000412966 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.39■□□□□ 0.21
RAB5A-202ENST00000412966 MINDY4BA8MYZ0 360 aa16.39■□□□□ 0.21
RAB5A-202ENST00000412966 SLC4A3P48751 1232 aa16.39■□□□□ 0.21
RAB5A-202ENST00000412966 KBTBD3Q8NAB2 608 aa16.39■□□□□ 0.21
RAB5A-202ENST00000412966 USP38Q8NB14 1042 aa16.39■□□□□ 0.21
RAB5A-202ENST00000412966 UPF3AQ9H1J1 476 aaKnown RBP16.39■□□□□ 0.21
RAB5A-202ENST00000412966 SLC38A10Q9HBR0 1119 aa16.39■□□□□ 0.21
RAB5A-202ENST00000412966 ELP1O95163 1332 aa16.39■□□□□ 0.21
RAB5A-202ENST00000412966 ZBED4O75132 1171 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 ASGR1P07306 291 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 C6orf222P0C671 652 aaPredicted RBP16.38■□□□□ 0.21
RAB5A-202ENST00000412966 MFSD5Q6N075 450 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 APPBP2Q92624 585 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 MKL1Q969V6 931 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 KATNBL1Q9H079 304 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 LRRC37A2A6NM11 1700 aa16.38■□□□□ 0.21
RAB5A-202ENST00000412966 CTAGE5O15320 804 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 GPAA1O43292 621 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 PRDM1O75626 825 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 GJA9P57773 515 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 TMEM240Q5SV17 173 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 C20orf194Q5TEA3 1177 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 TSHZ3Q63HK5 1081 aa16.37■□□□□ 0.21
RAB5A-202ENST00000412966 ARMCX2Q7L311 632 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms