RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 NDUFB10O96000 172 aa22.26■■□□□ 1.15
ITGA6-204ENST00000412899 ZFYP08048 801 aaPredicted RBP22.26■■□□□ 1.15
ITGA6-204ENST00000412899 ZNF865P0CJ78 1059 aaPredicted RBP22.26■■□□□ 1.15
ITGA6-204ENST00000412899 GNAT2P19087 354 aa22.26■■□□□ 1.15
ITGA6-204ENST00000412899 TLE2Q04725 743 aa22.26■■□□□ 1.15
ITGA6-204ENST00000412899 TSHZ3Q63HK5 1081 aa22.26■■□□□ 1.15
ITGA6-204ENST00000412899 CPXCR1Q8N123 301 aa22.26■■□□□ 1.15
ITGA6-204ENST00000412899 TACC3Q9Y6A5 838 aa22.26■■□□□ 1.15
ITGA6-204ENST00000412899 TRIM43BA6NCK2 446 aa22.25■■□□□ 1.15
ITGA6-204ENST00000412899 ZBED4O75132 1171 aa22.25■■□□□ 1.15
ITGA6-204ENST00000412899 C9orf50Q5SZB4 431 aa22.25■■□□□ 1.15
ITGA6-204ENST00000412899 TRIM43Q96BQ3 446 aaPredicted RBP22.25■■□□□ 1.15
ITGA6-204ENST00000412899 GUCD1Q96NT3 240 aa22.25■■□□□ 1.15
ITGA6-204ENST00000412899 RIPK3Q9Y572 518 aa22.25■■□□□ 1.15
ITGA6-204ENST00000412899 PLXNA1Q9UIW2 1896 aa22.24■■□□□ 1.15
ITGA6-204ENST00000412899 GREB1LQ9C091 1923 aaPredicted RBP22.24■■□□□ 1.15
ITGA6-204ENST00000412899 PRDM1O75626 825 aa22.24■■□□□ 1.15
ITGA6-204ENST00000412899 LRRFIP1Q32MZ4 808 aaKnown RBP22.24■■□□□ 1.15
ITGA6-204ENST00000412899 MSL3Q8N5Y2 521 aaKnown RBP22.24■■□□□ 1.15
ITGA6-204ENST00000412899 KIFC2Q96AC6 838 aa22.24■■□□□ 1.15
ITGA6-204ENST00000412899 LENG1Q96BZ8 264 aaPredicted RBP22.24■■□□□ 1.15
ITGA6-204ENST00000412899 EPB41L4AQ9HCS5 686 aaPredicted RBP22.24■■□□□ 1.15
ITGA6-204ENST00000412899 SMCHD1A6NHR9 2005 aa22.24■■□□□ 1.15
ITGA6-204ENST00000412899 A0A1W2PQ45 241 aaPredicted RBP22.23■■□□□ 1.15
ITGA6-204ENST00000412899 A0A1W2PQY0 241 aa22.23■■□□□ 1.15
ITGA6-204ENST00000412899 CLTBP09497 229 aa22.23■■□□□ 1.15
ITGA6-204ENST00000412899 AAMPQ13685 434 aa22.23■■□□□ 1.15
ITGA6-204ENST00000412899 FAM184BQ9ULE4 1060 aa22.23■■□□□ 1.15
ITGA6-204ENST00000412899 IGKV6D-41A0A0C4DH26 115 aa22.22■■□□□ 1.15
ITGA6-204ENST00000412899 M0R2C6 588 aa22.22■■□□□ 1.15
ITGA6-204ENST00000412899 ATP2A1O14983 1001 aa22.22■■□□□ 1.15
ITGA6-204ENST00000412899 CEP95Q96GE4 821 aa22.22■■□□□ 1.15
ITGA6-204ENST00000412899 RAVER2Q9HCJ3 691 aaKnown RBP22.22■■□□□ 1.15
ITGA6-204ENST00000412899 ZHX1Q9UKY1 873 aaPredicted RBP22.22■■□□□ 1.15
ITGA6-204ENST00000412899 SYNGAP1Q96PV0 1343 aa22.22■■□□□ 1.15
ITGA6-204ENST00000412899 COL6A3P12111 3177 aa22.22■■□□□ 1.15
ITGA6-204ENST00000412899 DNAJC25-GNG10A0A024R161 153 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 PATL2C9JE40 543 aaKnown RBP22.21■■□□□ 1.15
ITGA6-204ENST00000412899 PQBP1O60828 265 aaKnown RBP22.21■■□□□ 1.15
ITGA6-204ENST00000412899 ADAMTS4O75173 837 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 SNAI1O95863 264 aaPredicted RBP22.21■■□□□ 1.15
ITGA6-204ENST00000412899 RAG1P15918 1043 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 MAMDC4Q6UXC1 1216 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 IFNL3Q8IZI9 196 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 ANKRD35Q8N283 1001 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 MKL1Q969V6 931 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 TSEN34Q9BSV6 310 aaKnown RBP22.21■■□□□ 1.15
ITGA6-204ENST00000412899 NACAP1Q9BZK3 213 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 STARD7Q9NQZ5 370 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 MTMR4Q9NYA4 1195 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 FEM1BQ9UK73 627 aa22.21■■□□□ 1.15
ITGA6-204ENST00000412899 TTLL1O95922 423 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 TSPY3P0CV98 308 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 TSPY8P0CW00 308 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 ITGB8P26012 769 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 ACLYP53396 1101 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 LRRC47Q8N1G4 583 aaKnown RBP22.2■■□□□ 1.14
ITGA6-204ENST00000412899 EXOC6Q8TAG9 804 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 NUP133Q8WUM0 1156 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 TMEM39AQ9NV64 488 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 FBXO40Q9UH90 709 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
ITGA6-204ENST00000412899 SYNPO2Q9UMS6 1093 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 SYNRGQ9UMZ2 1314 aa22.2■■□□□ 1.14
ITGA6-204ENST00000412899 ERC2O15083 957 aa22.19■■□□□ 1.14
ITGA6-204ENST00000412899 SMAD3P84022 425 aaKnown RBP22.19■■□□□ 1.14
ITGA6-204ENST00000412899 PDE4BQ07343 736 aa22.19■■□□□ 1.14
ITGA6-204ENST00000412899 ZNF467Q7Z7K2 595 aaPredicted RBP22.19■■□□□ 1.14
ITGA6-204ENST00000412899 SLC38A10Q9HBR0 1119 aa22.19■■□□□ 1.14
ITGA6-204ENST00000412899 TTC41PQ6P2S7 1318 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 MOXD2PA6NHM9 499 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 DCDC2CA8MYV0 355 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 KIAA0355O15063 1070 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 SLC3A2P08195 630 aaKnown RBP22.18■■□□□ 1.14
ITGA6-204ENST00000412899 HDAC1Q13547 482 aaPredicted RBP22.18■■□□□ 1.14
ITGA6-204ENST00000412899 ACVR2BQ13705 512 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 KCNA10Q16322 511 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 SLFN13Q68D06 897 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.18■■□□□ 1.14
ITGA6-204ENST00000412899 GMCL1P1Q8NEA9 526 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 CHST13Q8NET6 341 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 RNPC3Q96LT9 517 aaKnown RBP22.18■■□□□ 1.14
ITGA6-204ENST00000412899 SEC62Q99442 399 aaKnown RBP22.18■■□□□ 1.14
ITGA6-204ENST00000412899 NAPBQ9H115 298 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.18■■□□□ 1.14
ITGA6-204ENST00000412899 DNAH12Q6ZR08 3092 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 MYH4Q9Y623 1939 aa22.18■■□□□ 1.14
ITGA6-204ENST00000412899 DUSP11O75319 330 aaKnown RBP22.17■■□□□ 1.14
ITGA6-204ENST00000412899 BMP3P12645 472 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 OAZ1P54368 228 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 KLHDC9Q8NEP7 349 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 NEDD1Q8NHV4 660 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 TOX2Q96NM4 488 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 CDX2Q99626 313 aaPredicted RBP22.17■■□□□ 1.14
ITGA6-204ENST00000412899 FSD1Q9BTV5 496 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 SEMA6BQ9H3T3 888 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 ABHD16BQ9H3Z7 469 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 SPC25Q9HBM1 224 aa22.17■■□□□ 1.14
ITGA6-204ENST00000412899 ZBTB47Q9UFB7 747 aaPredicted RBP22.17■■□□□ 1.14
ITGA6-204ENST00000412899 C6orf222P0C671 652 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms