RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FAM214BQ7L5A3 538 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 FMNL3Q8IVF7 1028 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 ZBTB38Q8NAP3 1195 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-204ENST00000412061 LRRN4CLQ8ND94 238 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 SLC26A8Q96RN1 970 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 PRR13Q9NZ81 148 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 APEX2Q9UBZ4 518 aa6.08□□□□□ -1.44
BRCA1-204ENST00000412061 CNTNAP4Q9C0A0 1308 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 A0A1W2PQU0 124 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 NOP56O00567 594 aaKnown RBP6.07□□□□□ -1.44
BRCA1-204ENST00000412061 ADCY3O60266 1144 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 CBX7O95931 251 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 PDGFRBP09619 1106 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 FAM153BP0C7A2 387 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 HSP90AA2PQ14568 343 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-204ENST00000412061 TMEM67Q5HYA8 995 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 NKAPLQ5M9Q1 402 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 RNF43Q68DV7 783 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 CRACR2BQ8N4Y2 399 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-204ENST00000412061 FBXL6Q8N531 539 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 ZNF513Q8N8E2 541 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-204ENST00000412061 DTWD2Q8NBA8 298 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 BVESQ8NE79 360 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 JDP2Q8WYK2 163 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 RCC1LQ96I51 464 aaKnown RBP6.07□□□□□ -1.44
BRCA1-204ENST00000412061 MFSD14AQ96MC6 490 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 PRDM14Q9GZV8 571 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 TMX1Q9H3N1 280 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 FHOD1Q9Y613 1164 aa6.07□□□□□ -1.44
BRCA1-204ENST00000412061 GNAT3A8MTJ3 354 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 LRRN2O75325 713 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 ITGAVP06756 1048 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 ZNF445P59923 1031 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 DUSP27Q5VZP5 1158 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 POMZP3Q6PJE2 187 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 C16orf86Q6ZW13 317 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 ZNF227Q86WZ6 799 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 CCDC146Q8IYE0 955 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 SYNPOQ8N3V7 929 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 ADCY4Q8NFM4 1077 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 PIWIL2Q8TC59 973 aaKnown RBP6.06□□□□□ -1.44
BRCA1-204ENST00000412061 SYTL5Q8TDW5 730 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-204ENST00000412061 PMM1Q92871 262 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 Q96M66 194 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 HEXIM2Q96MH2 286 aaKnown RBP6.06□□□□□ -1.44
BRCA1-204ENST00000412061 AARSD1Q9BTE6 412 aaKnown RBP6.06□□□□□ -1.44
BRCA1-204ENST00000412061 ASCC2Q9H1I8 757 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-204ENST00000412061 TPSG1Q9NRR2 321 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 AKT3Q9Y243 479 aa6.06□□□□□ -1.44
BRCA1-204ENST00000412061 TRAV20A0A0B4J274 112 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 CCDC163A0A0D9SF12 145 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 FAM170BA6NMN3 283 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 GSC2O15499 205 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 F13BP05160 661 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-204ENST00000412061 PPP2R2AP63151 447 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 NFIAQ12857 509 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 SNW1Q13573 536 aaKnown RBP6.05□□□□□ -1.44
BRCA1-204ENST00000412061 TAF7LQ5H9L4 462 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 ZNF765Q7L2R6 523 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 TICAM2Q86XR7 235 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 MFSD4AQ8N468 514 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 ARHGEF39Q8N4T4 335 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 BRF1Q92994 677 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 IPO9Q96P70 1041 aaKnown RBP6.05□□□□□ -1.44
BRCA1-204ENST00000412061 CDC6Q99741 560 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 DBNDD2Q9BQY9 259 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 METTL22Q9BUU2 404 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-204ENST00000412061 DSCC1Q9BVC3 393 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 ARHGEF4Q9NR80 690 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 GFOD1Q9NXC2 390 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 CGGBP1Q9UFW8 167 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-204ENST00000412061 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
BRCA1-204ENST00000412061 EMC9Q9Y3B6 208 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 CAPN6Q9Y6Q1 641 aa6.05□□□□□ -1.44
BRCA1-204ENST00000412061 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 PRR33A8MZF0 331 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 SIGLEC6O43699 453 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 MASP1P48740 699 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 NMIQ13287 307 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-204ENST00000412061 TCEA2Q15560 299 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 ODR4Q5SWX8 454 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 TMC3Q7Z5M5 1100 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 KIAA0907Q7Z7F0 614 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-204ENST00000412061 TRIM59Q8IWR1 403 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 CCAR1Q8IX12 1150 aaKnown RBP6.04□□□□□ -1.44
BRCA1-204ENST00000412061 SMC5Q8IY18 1101 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 SHISA5Q8N114 240 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 FIBCD1Q8N539 461 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 PRPF38AQ8NAV1 312 aaKnown RBP6.04□□□□□ -1.44
BRCA1-204ENST00000412061 UBE2Q2Q8WVN8 375 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 CCDC136Q96JN2 1154 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 MRGPRX3Q96LB0 322 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 FEZ1Q99689 392 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 NOL6Q9H6R4 1146 aaKnown RBP6.04□□□□□ -1.44
BRCA1-204ENST00000412061 CHST7Q9NS84 486 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 ATG3Q9NT62 314 aa6.04□□□□□ -1.44
BRCA1-204ENST00000412061 TYW1Q9NV66 732 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms