RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 FLOT1O75955 427 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 SLC16A2P36021 539 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 VEGFBP49765 207 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 IKQ13123 557 aaPredicted RBP18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 PABPC4Q13310 644 aaKnown RBP eCLIP18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 NBPF11Q86T75 865 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 UBA5Q9GZZ9 404 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 SLC45A1Q9Y2W3 748 aa18.34■□□□□ 0.53
AP001056.1-201ENST00000411956 PDHXO00330 501 aa18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 FUT2Q10981 343 aa18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 NTRK3Q16288 839 aa18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 SYDE2Q5VT97 1194 aa18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 SPZ1Q9BXG8 430 aa18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 RBM19Q9Y4C8 960 aaKnown RBP18.33■□□□□ 0.52
AP001056.1-201ENST00000411956 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 CPLX1O14810 134 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 CYTH3O43739 400 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 OSBPP22059 807 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 SMARCA1P28370 1054 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 DSG3P32926 999 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 TM4SF4P48230 202 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 INHBEP58166 350 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 IRX3P78415 501 aaPredicted RBP18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 IFNL1Q8IU54 200 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 ZCCHC17Q9NP64 241 aaKnown RBP18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 PNMA3Q9UL41 463 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 PRR12Q9ULL5 1215 aa18.32■□□□□ 0.52
AP001056.1-201ENST00000411956 SPDYE16A6NNV3 312 aaPredicted RBP18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 DHX16O60231 1041 aaKnown RBP18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 IFNAR1P17181 557 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 CUL4AQ13619 759 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 COG2Q14746 738 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 ADGRF4Q8IZF3 695 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 CCDC82Q8N4S0 544 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 ATG4CQ96DT6 458 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
AP001056.1-201ENST00000411956 CDKL5O76039 1030 aa18.3■□□□□ 0.52
AP001056.1-201ENST00000411956 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
AP001056.1-201ENST00000411956 NSUN7Q8NE18 718 aaKnown RBP18.3■□□□□ 0.52
AP001056.1-201ENST00000411956 PHKBQ93100 1093 aa18.3■□□□□ 0.52
AP001056.1-201ENST00000411956 MTMR8Q96EF0 704 aa18.3■□□□□ 0.52
AP001056.1-201ENST00000411956 RANBP17Q9H2T7 1088 aaKnown RBP18.3■□□□□ 0.52
AP001056.1-201ENST00000411956 JMJD4Q9H9V9 463 aa18.3■□□□□ 0.52
AP001056.1-201ENST00000411956 PTPDC1A2A3K4 754 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 DTNBO60941 627 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 PPFIA3O75145 1194 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 CYP2C8P10632 490 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 MAP2K2P36507 400 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 HERVK_113P62684 666 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 BECN1Q14457 450 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 CDC37Q16543 378 aaPredicted RBP18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 PIGSQ96S52 555 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 PARK7Q99497 189 aaKnown RBP18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 LLPHQ9BRT6 129 aaKnown RBP18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 RNF26Q9BY78 433 aaPredicted RBP18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 VAT1LQ9HCJ6 419 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 ADAMTS5Q9UNA0 930 aa18.29■□□□□ 0.52
AP001056.1-201ENST00000411956 STK36Q9NRP7 1315 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 VWA5AO00534 786 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 JAK2O60674 1132 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 FMNL1O95466 1100 aaPredicted RBP18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 SNAP25P60880 206 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 OTUD7BQ6GQQ9 843 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 HOMER1Q86YM7 354 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 SLC26A6Q9BXS9 759 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 SLC38A10Q9HBR0 1119 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
AP001056.1-201ENST00000411956 ADGRA2Q96PE1 1338 aa18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 PRPF3O43395 683 aaKnown RBP18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 FDX1P10109 184 aa18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 SSRP1Q08945 709 aaKnown RBP18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 TAF1CQ15572 869 aaPredicted RBP18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 QRICH1Q2TAL8 776 aa18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 POTEEQ6S8J3 1075 aa18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 TRIM22Q8IYM9 498 aa18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.52
AP001056.1-201ENST00000411956 hCG_1642624A0A1W2PR95 340 aa18.26■□□□□ 0.51
AP001056.1-201ENST00000411956 ZBTB5O15062 677 aa18.26■□□□□ 0.51
AP001056.1-201ENST00000411956 ZBED4O75132 1171 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms