RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ADAMTS4O75173 837 aa17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 RASA1P20936 1047 aa17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 STRBPQ96SI9 672 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 TSEN34Q9BSV6 310 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 TEX13BQ9BXU2 312 aa17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 NYAP2Q9P242 653 aa17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 FAM184BQ9ULE4 1060 aa17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
HLA-DQB2-229ENST00000411527 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MINDY4BA8MYZ0 360 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 F5H6K3 240 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SNAI1O95863 264 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ACLYP53396 1101 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 FPGSQ05932 587 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 KLRC3Q07444 240 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SBK1Q52WX2 424 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MSL3Q8N5Y2 521 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 PRPF38AQ8NAV1 312 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 STARD7Q9NQZ5 370 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MYH4Q9Y623 1939 aa17.06■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SYNGAP1Q96PV0 1343 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 SYNRGQ9UMZ2 1314 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ZBED4O75132 1171 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 NDUFB10O96000 172 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 TOX2Q96NM4 488 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ZHX1Q9UKY1 873 aaPredicted RBP17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 CTDP1Q9Y5B0 961 aaPredicted RBP17.05■□□□□ 0.32
HLA-DQB2-229ENST00000411527 DNAJC25-GNG10A0A024R161 153 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 FOSL2P15408 326 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 KCNA10Q16322 511 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 GIMAP6Q6P9H5 292 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ANKRD33Q7Z3H0 272 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 KLHDC9Q8NEP7 349 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MOXD2PA6NHM9 499 aa17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ATP2A1O14983 1001 aa17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 DUSP11O75319 330 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 CCSAPQ6IQ19 270 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ZNF444Q8N0Y2 327 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 OSBP2Q969R2 916 aa17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 KIFC2Q96AC6 838 aa17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 RAVER2Q9HCJ3 691 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MCM3APO60318 1980 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 TMEM265A0A087WTH1 108 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 MYADML2A6NDP7 307 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 IRX5P78411 483 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ACVR2BQ13705 512 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ZNF467Q7Z7K2 595 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 APPBP2Q92624 585 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB2-229ENST00000411527 IGKV6D-41A0A0C4DH26 115 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 PRDM1O75626 825 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TIMP1P01033 207 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 APPP05067 770 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 C6orf222P0C671 652 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TDO2P48775 406 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 MKL1Q969V6 931 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GLT1D1Q96MS3 346 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ABHD16BQ9H3Z7 469 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 SLC38A10Q9HBR0 1119 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ZNF287Q9HBT7 754 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 FEM1BQ9UK73 627 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 EYSQ5T1H1 3165 aa17.01■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ELP1O95163 1332 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GPAA1O43292 621 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ADCY6O43306 1168 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ASGR1P07306 291 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CST5P28325 142 aaPredicted RBP17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GRIN2CQ14957 1233 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CCDC144BQ3MJ40 725 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CEP95Q96GE4 821 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 BUD13Q9BRD0 619 aaKnown RBP eCLIP17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 SPC25Q9HBM1 224 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 EPB41L4AQ9HCS5 686 aaPredicted RBP17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 MTMR4Q9NYA4 1195 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 RCAN3Q9UKA8 241 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TBX21Q9UL17 535 aa17■□□□□ 0.31
HLA-DQB2-229ENST00000411527 MROH7Q68CQ1 1323 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TTLL1O95922 423 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GNAT2P19087 354 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 DNAJB2P25686 324 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CDK7P50613 346 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GNASQ5JWF2 1037 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms