RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-209ENST00000410038 ZNF274Q96GC6 653 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-209ENST00000410038 A0A0G2JMZ2 1700 aa16.74■□□□□ 0.27
LIMS2-209ENST00000410038 SPDYE16A6NNV3 312 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-209ENST00000410038 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 ST18O60284 1047 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 DSG3P32926 999 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 SLC16A2P36021 539 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 HERVK_113P62684 666 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 IKQ13123 557 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-209ENST00000410038 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-209ENST00000410038 BTNL9Q6UXG8 535 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 CHURC1Q8WUH1 139 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
LIMS2-209ENST00000410038 SLF1Q9BQI6 1058 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 UBA5Q9GZZ9 404 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 CPVLQ9H3G5 476 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 RNF186Q9NXI6 227 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 PPP1R9AQ9ULJ8 1098 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 MYPNQ86TC9 1320 aa16.73■□□□□ 0.27
LIMS2-209ENST00000410038 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 CD2BP2O95400 341 aaKnown RBP16.72■□□□□ 0.27
LIMS2-209ENST00000410038 KIF5BP33176 963 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
LIMS2-209ENST00000410038 POTEEQ6S8J3 1075 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 PRPF38AQ8NAV1 312 aaKnown RBP16.72■□□□□ 0.27
LIMS2-209ENST00000410038 KIFC2Q96AC6 838 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 CASP8AP2Q9UKL3 1982 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 NID2Q14112 1375 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 CDC27P30260 824 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 CRHR2Q13324 411 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 RTN1Q16799 776 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 SMCR8Q8TEV9 937 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-209ENST00000410038 ATG4CQ96DT6 458 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
LIMS2-209ENST00000410038 PRR12Q9ULL5 1215 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 ADAMTS5Q9UNA0 930 aa16.72■□□□□ 0.27
LIMS2-209ENST00000410038 TRPA1O75762 1119 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 LARGE1O95461 756 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 CCT2P78371 535 aaKnown RBP16.71■□□□□ 0.27
LIMS2-209ENST00000410038 STK3Q13188 491 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 ME3Q16798 604 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 SLC35G1Q2M3R5 365 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 ZFYVE28Q9HCC9 887 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 RBM28Q9NW13 759 aaKnown RBP16.71■□□□□ 0.27
LIMS2-209ENST00000410038 LIMCH1Q9UPQ0 1083 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 ADGRA2Q96PE1 1338 aa16.71■□□□□ 0.27
LIMS2-209ENST00000410038 VWA5AO00534 786 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
LIMS2-209ENST00000410038 GNAQP50148 359 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 PPP2R5BQ15173 497 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 TMTC3Q6ZXV5 915 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 CMTR1Q8N1G2 835 aaKnown RBP16.7■□□□□ 0.26
LIMS2-209ENST00000410038 CFHR5Q9BXR6 569 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 NCOA5Q9HCD5 579 aaKnown RBP16.7■□□□□ 0.26
LIMS2-209ENST00000410038 TSKSQ9UJT2 592 aa16.7■□□□□ 0.26
LIMS2-209ENST00000410038 CCDC85CA6NKD9 419 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 CYTH3O43739 400 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 TLR2O60603 784 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 PFKFB2O60825 505 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 TBC1D8O95759 1140 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-209ENST00000410038 SRBD1Q8N5C6 995 aaKnown RBP16.69■□□□□ 0.26
LIMS2-209ENST00000410038 SLKQ9H2G2 1235 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-209ENST00000410038 RBPJLQ9UBG7 517 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 PEX10O60683 326 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 RGS19P49795 217 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 SCRN1Q12765 414 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 REPS2Q8NFH8 660 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 MCOLN1Q9GZU1 580 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 RIOX1Q9H6W3 641 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 JMJD4Q9H9V9 463 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 SLC38A10Q9HBR0 1119 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 VAT1LQ9HCJ6 419 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 TXNRD2Q9NNW7 524 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 BTBD7Q9P203 1132 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 RABGAP1Q9Y3P9 1069 aa16.69■□□□□ 0.26
LIMS2-209ENST00000410038 DHX16O60231 1041 aaKnown RBP16.68■□□□□ 0.26
LIMS2-209ENST00000410038 CNMDO75829 334 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 FDX1P10109 184 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 MCM2P49736 904 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 SNAP25P60880 206 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 FUT2Q10981 343 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 C17orf99Q6UX52 265 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 CCDC82Q8N4S0 544 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 MB21D1Q8N884 522 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
LIMS2-209ENST00000410038 GTF3C2Q8WUA4 911 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms