RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CPXCR1Q8N123 301 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 CHST13Q8NET6 341 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 LBHD1Q9BQE6 289 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-210ENST00000409954 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 ATN1P54259 1190 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-210ENST00000409954 LRRC41Q15345 812 aa17.23■□□□□ 0.35
MCF2L-210ENST00000409954 FAM47AQ5JRC9 791 aa17.23■□□□□ 0.35
MCF2L-210ENST00000409954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
MCF2L-210ENST00000409954 RNF180Q86T96 592 aa17.23■□□□□ 0.35
MCF2L-210ENST00000409954 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-210ENST00000409954 ANAPC4Q9UJX5 808 aa17.23■□□□□ 0.35
MCF2L-210ENST00000409954 RLFQ13129 1914 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 PLA2G6O60733 806 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 C1orf53Q5VUE5 145 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 ZNF467Q7Z7K2 595 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-210ENST00000409954 FAM160B2Q86V87 743 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 STAG1Q8WVM7 1258 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 FAM184BQ9ULE4 1060 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 RIPK3Q9Y572 518 aa17.22■□□□□ 0.35
MCF2L-210ENST00000409954 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 DNAJC25-GNG10A0A024R161 153 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 TMEM232C9JQI7 657 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-210ENST00000409954 ZNF865P0CJ78 1059 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-210ENST00000409954 AKR1A1P14550 325 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 ADCYAP1R1P41586 468 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 STAT2P52630 851 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 RTP1P59025 263 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 MCMDC2Q4G0Z9 681 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 RCSD1Q6JBY9 416 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 ANKRD35Q8N283 1001 aa17.21■□□□□ 0.35
MCF2L-210ENST00000409954 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
MCF2L-210ENST00000409954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.35
MCF2L-210ENST00000409954 SYNGAP1Q96PV0 1343 aa17.21■□□□□ 0.34
MCF2L-210ENST00000409954 MYH7P12883 1935 aa17.2■□□□□ 0.34
MCF2L-210ENST00000409954 SOX1O00570 391 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-210ENST00000409954 FGRP09769 529 aa17.2■□□□□ 0.34
MCF2L-210ENST00000409954 SLC1A4P43007 532 aa17.2■□□□□ 0.34
MCF2L-210ENST00000409954 MDM2Q00987 491 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-210ENST00000409954 LRRC47Q8N1G4 583 aaKnown RBP17.2■□□□□ 0.34
MCF2L-210ENST00000409954 TSEN34Q9BSV6 310 aaKnown RBP17.2■□□□□ 0.34
MCF2L-210ENST00000409954 PHF24Q9UPV7 400 aa17.2■□□□□ 0.34
MCF2L-210ENST00000409954 ATP11BQ9Y2G3 1177 aa17.2■□□□□ 0.34
MCF2L-210ENST00000409954 ZNF236Q9UL36 1845 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 ORC4O43929 436 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 MCCP23508 829 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 CTDSPL2Q05D32 466 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 SNX17Q15036 470 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 TKFCQ3LXA3 575 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 LRCH3Q96II8 777 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 STX8Q9UNK0 236 aa17.19■□□□□ 0.34
MCF2L-210ENST00000409954 FOXP2O15409 715 aa17.18■□□□□ 0.34
MCF2L-210ENST00000409954 RANBP6O60518 1105 aaKnown RBP17.18■□□□□ 0.34
MCF2L-210ENST00000409954 SNAI1O95863 264 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-210ENST00000409954 FGAP02671 866 aa17.18■□□□□ 0.34
MCF2L-210ENST00000409954 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-210ENST00000409954 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-210ENST00000409954 SMC5Q8IY18 1101 aa17.18■□□□□ 0.34
MCF2L-210ENST00000409954 FERMT2Q96AC1 680 aa17.18■□□□□ 0.34
MCF2L-210ENST00000409954 ABHD16BQ9H3Z7 469 aa17.18■□□□□ 0.34
MCF2L-210ENST00000409954 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
MCF2L-210ENST00000409954 A0A0G2JMZ2 1700 aa17.18■□□□□ 0.34
MCF2L-210ENST00000409954 PGK1P00558 417 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 NOVP48745 357 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
MCF2L-210ENST00000409954 ACVR2BQ13705 512 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 INCENPQ9NQS7 918 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 TCP11L1Q9NUJ3 509 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
MCF2L-210ENST00000409954 TACC3Q9Y6A5 838 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 MYH8P13535 1937 aa17.17■□□□□ 0.34
MCF2L-210ENST00000409954 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
MCF2L-210ENST00000409954 DUSP11O75319 330 aaKnown RBP17.16■□□□□ 0.34
MCF2L-210ENST00000409954 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
MCF2L-210ENST00000409954 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
MCF2L-210ENST00000409954 TTC14Q96N46 770 aa17.16■□□□□ 0.34
MCF2L-210ENST00000409954 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
MCF2L-210ENST00000409954 ACAD9Q9H845 621 aa17.16■□□□□ 0.34
MCF2L-210ENST00000409954 SPC25Q9HBM1 224 aa17.16■□□□□ 0.34
MCF2L-210ENST00000409954 MOXD2PA6NHM9 499 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 POTEB2H3BUK9 544 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
MCF2L-210ENST00000409954 TLE2Q04725 743 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 KLHDC9Q8NEP7 349 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 DCAF4Q8WV16 495 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 FAM227BQ96M60 508 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 TOMM22Q9NS69 142 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms