RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 CALML3P27482 149 aa20.14■□□□□ 0.81
LRPPRC-203ENST00000409946 NAPAP54920 295 aa20.14■□□□□ 0.81
LRPPRC-203ENST00000409946 RASA3Q14644 834 aa20.14■□□□□ 0.81
LRPPRC-203ENST00000409946 SLFN13Q68D06 897 aa20.14■□□□□ 0.81
LRPPRC-203ENST00000409946 ADGRF4Q8IZF3 695 aa20.14■□□□□ 0.81
LRPPRC-203ENST00000409946 CCDC148Q8NFR7 591 aa20.14■□□□□ 0.81
LRPPRC-203ENST00000409946 RRAGDQ9NQL2 400 aaPredicted RBP20.14■□□□□ 0.81
LRPPRC-203ENST00000409946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 A0A1W2PRG0 241 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 GRIN1Q05586 938 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 KIF4BQ2VIQ3 1234 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 FMR1NBQ8N0W7 255 aaPredicted RBP20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 RNF214Q8ND24 703 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 NUP88Q99567 741 aaPredicted RBP20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 FUCA2Q9BTY2 467 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 JMJD4Q9H9V9 463 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 TRIM75PA6NK02 468 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 M0R2N6 131 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 GPATCH4Q5T3I0 446 aaKnown RBP20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 JMYQ8N9B5 988 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 HACL1Q9UJ83 578 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 ZBTB21Q9ULJ3 1066 aa20.13■□□□□ 0.81
LRPPRC-203ENST00000409946 USP17L10C9JJH3 530 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 PFKFB1P16118 471 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 LMNB1P20700 586 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 ECE1P42892 770 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 SLC1A4P43007 532 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 TNNI2P48788 182 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 ZNF174Q15697 407 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 COA7Q96BR5 231 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 NOL7Q9UMY1 257 aaKnown RBP20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 PCDHA6Q9UN73 950 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 PCDHA8Q9Y5H6 950 aa20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 POLR2AP24928 1970 aaKnown RBP20.12■□□□□ 0.81
LRPPRC-203ENST00000409946 F5H6K3 240 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 PPP1R11O60927 126 aaPredicted RBP20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 NDUFB10O96000 172 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 CMA1P23946 247 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 KLRC3Q07444 240 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 SPECC1Q5M775 1068 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 TTC38Q5R3I4 469 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 DAGLBQ8NCG7 672 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 ACER1Q8TDN7 264 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 DCAF4Q8WV16 495 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 TEPSINQ96N21 525 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 SYT17Q9BSW7 474 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 SMCO2A6NFE2 343 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 TBC1D12O60347 775 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 KINO60870 393 aaKnown RBP20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 CUTAO60888 179 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 CCDC84Q86UT8 332 aaPredicted RBP20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 KRI1Q8N9T8 703 aaKnown RBP20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 ZMYND12Q9H0C1 365 aa20.11■□□□□ 0.81
LRPPRC-203ENST00000409946 CLCN1P35523 988 aa20.1■□□□□ 0.81
LRPPRC-203ENST00000409946 MMP14P50281 582 aa20.1■□□□□ 0.81
LRPPRC-203ENST00000409946 RBM43Q6ZSC3 357 aaKnown RBP20.1■□□□□ 0.81
LRPPRC-203ENST00000409946 GMCL1P1Q8NEA9 526 aa20.1■□□□□ 0.81
LRPPRC-203ENST00000409946 TRPM4Q8TD43 1214 aa20.1■□□□□ 0.81
LRPPRC-203ENST00000409946 YBX3P16989 372 aaKnown RBP eCLIP20.09■□□□□ 0.812e-26■■■■□ 20.7
LRPPRC-203ENST00000409946 KIAA1755Q5JYT7 1200 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 RESP18Q5W5W9 173 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 SPICE1Q8N0Z3 855 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 CEP131Q9UPN4 1083 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 ESPNB1AK53 854 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 PTPREP23469 700 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 CAP2P40123 477 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 TNFAIP1Q13829 316 aa20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 CCDC12Q8WUD4 166 aaPredicted RBP20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 ERCC4Q92889 916 aaPredicted RBP20.09■□□□□ 0.81
LRPPRC-203ENST00000409946 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 CCDC194A0A1B0GVG4 234 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 MCM7P33993 719 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 SNAP25P60880 206 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 GALNT17Q6IS24 598 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 ILDR2Q71H61 639 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 MTMR8Q96EF0 704 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 ARHGEF10LQ9HCE6 1279 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 C6orf50Q9HD87 102 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 GPRC5DQ9NZD1 345 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 HPSEQ9Y251 543 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 SMCHD1A6NHR9 2005 aa20.08■□□□□ 0.8
LRPPRC-203ENST00000409946 H7C1D1 291 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 ZNF202O95125 648 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 MAP3K10Q02779 954 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 TYRO3Q06418 890 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 INF2Q27J81 1249 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 HS1BP3Q53T59 392 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 GMCL1Q96IK5 515 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 PDLIM2Q96JY6 352 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 TMEM260Q9NX78 707 aa20.07■□□□□ 0.8
LRPPRC-203ENST00000409946 ZBTB5O15062 677 aa20.06■□□□□ 0.8
LRPPRC-203ENST00000409946 EPS15P42566 896 aa20.06■□□□□ 0.8
LRPPRC-203ENST00000409946 PTGDRQ13258 359 aa20.06■□□□□ 0.8
LRPPRC-203ENST00000409946 ZYXQ15942 572 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms