RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TOMM22Q9NS69 142 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 RIPK3Q9Y572 518 aa20.96■□□□□ 0.95
LSM5-204ENST00000409909 H0YGN5 161 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 MCCP23508 829 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 OLFML2BQ68BL8 750 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 TBC1D10CQ8IV04 446 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 GMCL1Q96IK5 515 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 HTATIP2Q9BUP3 242 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 IL25Q9H293 177 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 SLC38A10Q9HBR0 1119 aa20.95■□□□□ 0.94
LSM5-204ENST00000409909 RANBP2P49792 3224 aaKnown RBP20.94■□□□□ 0.94
LSM5-204ENST00000409909 TMEM232C9JQI7 657 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 ATP2A1O14983 1001 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 ZBED4O75132 1171 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 PGK2P07205 417 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 PPP4R3BQ5MIZ7 849 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 AKNAD1Q5T1N1 836 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 SNRNP48Q6IEG0 339 aaKnown RBP20.94■□□□□ 0.94
LSM5-204ENST00000409909 RASGRP2Q7LDG7 609 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 MMP19Q99542 508 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 TEX13BQ9BXU2 312 aa20.94■□□□□ 0.94
LSM5-204ENST00000409909 SLC1A4P43007 532 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 MFSD6Q6ZSS7 791 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 NECAB2Q7Z6G3 386 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 CPXCR1Q8N123 301 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 STAG1Q8WVM7 1258 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 MAML3Q96JK9 1138 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 RAVER2Q9HCJ3 691 aaKnown RBP20.93■□□□□ 0.94
LSM5-204ENST00000409909 TCP11L1Q9NUJ3 509 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
LSM5-204ENST00000409909 CYBAP13498 195 aa20.92■□□□□ 0.94
LSM5-204ENST00000409909 COPB2P35606 906 aa20.92■□□□□ 0.94
LSM5-204ENST00000409909 KCTD2Q14681 263 aa20.92■□□□□ 0.94
LSM5-204ENST00000409909 RCSD1Q6JBY9 416 aa20.92■□□□□ 0.94
LSM5-204ENST00000409909 KCTD1Q719H9 257 aa20.92■□□□□ 0.94
LSM5-204ENST00000409909 ZNF213O14771 459 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 PCP11498 1178 aaKnown RBP20.91■□□□□ 0.94
LSM5-204ENST00000409909 CNGA1P29973 690 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 NEDD4P46934 1319 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 SLC4A3P48751 1232 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 STAT2P52630 851 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 ZNF792Q3KQV3 632 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 PRAMEF19Q5SWL8 479 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 TMEM47Q9BQJ4 181 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 DSCC1Q9BVC3 393 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 ISY1Q9ULR0 285 aaKnown RBP20.91■□□□□ 0.94
LSM5-204ENST00000409909 MTMR7Q9Y216 660 aa20.91■□□□□ 0.94
LSM5-204ENST00000409909 PLA2G6O60733 806 aa20.9■□□□□ 0.94
LSM5-204ENST00000409909 FAM160B2Q86V87 743 aa20.9■□□□□ 0.94
LSM5-204ENST00000409909 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
LSM5-204ENST00000409909 DDX20Q9UHI6 824 aaKnown RBP20.9■□□□□ 0.94
LSM5-204ENST00000409909 CTDP1Q9Y5B0 961 aaPredicted RBP20.9■□□□□ 0.94
LSM5-204ENST00000409909 ALPK3Q96L96 1907 aa20.9■□□□□ 0.94
LSM5-204ENST00000409909 PLXNA1Q9UIW2 1896 aa20.9■□□□□ 0.94
LSM5-204ENST00000409909 FRMPD3Q5JV73 1810 aa20.9■□□□□ 0.94
LSM5-204ENST00000409909 ZNF536O15090 1300 aa20.89■□□□□ 0.93
LSM5-204ENST00000409909 TOP1P11387 765 aaKnown RBP20.89■□□□□ 0.93
LSM5-204ENST00000409909 OAZ1P54368 228 aa20.89■□□□□ 0.93
LSM5-204ENST00000409909 RNF41Q9H4P4 317 aaPredicted RBP20.89■□□□□ 0.93
LSM5-204ENST00000409909 C11orf49Q9H6J7 331 aa20.89■□□□□ 0.93
LSM5-204ENST00000409909 DIS3Q9Y2L1 958 aaKnown RBP20.89■□□□□ 0.93
LSM5-204ENST00000409909 LAMA4Q16363 1823 aa20.89■□□□□ 0.93
LSM5-204ENST00000409909 PFASO15067 1338 aa20.88■□□□□ 0.93
LSM5-204ENST00000409909 DNAJC25-GNG10A0A024R161 153 aa20.88■□□□□ 0.93
LSM5-204ENST00000409909 FDX1P10109 184 aa20.88■□□□□ 0.93
LSM5-204ENST00000409909 COL6A1P12109 1028 aa20.88■□□□□ 0.93
LSM5-204ENST00000409909 SNAP25P60880 206 aa20.88■□□□□ 0.93
LSM5-204ENST00000409909 IKQ13123 557 aaPredicted RBP20.88■□□□□ 0.93
LSM5-204ENST00000409909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.88■□□□□ 0.93
LSM5-204ENST00000409909 DCAF4Q8WV16 495 aa20.88■□□□□ 0.93
LSM5-204ENST00000409909 TINF2Q9BSI4 451 aa20.88■□□□□ 0.93
LSM5-204ENST00000409909 EVI5O60447 810 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 CHMLP26374 656 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 TTBK2Q6IQ55 1244 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 ESR2Q92731 530 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 AGBL1Q96MI9 1066 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 TTC14Q96N46 770 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 PRR12Q9ULL5 1215 aa20.87■□□□□ 0.93
LSM5-204ENST00000409909 SEPT4O43236 478 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 MSCO60682 206 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 ANO1Q5XXA6 986 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 CHST13Q8NET6 341 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 DDX11Q96FC9 970 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 HOMER2Q9NSB8 354 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 CTNNA3Q9UI47 895 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 COLQQ9Y215 455 aaPredicted RBP20.86■□□□□ 0.93
LSM5-204ENST00000409909 NR2E3Q9Y5X4 410 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 SMCHD1A6NHR9 2005 aa20.86■□□□□ 0.93
LSM5-204ENST00000409909 KDM4AO75164 1064 aa20.85■□□□□ 0.93
LSM5-204ENST00000409909 TAL1P17542 331 aaPredicted RBP20.85■□□□□ 0.93
LSM5-204ENST00000409909 SLC16A2P36021 539 aa20.85■□□□□ 0.93
LSM5-204ENST00000409909 IMMTQ16891 758 aaKnown RBP20.85■□□□□ 0.93
LSM5-204ENST00000409909 CCDC96Q2M329 555 aa20.85■□□□□ 0.93
LSM5-204ENST00000409909 CCDC174Q6PII3 467 aa20.85■□□□□ 0.93
LSM5-204ENST00000409909 BTNL9Q6UXG8 535 aa20.85■□□□□ 0.93
LSM5-204ENST00000409909 FBXO40Q9UH90 709 aa20.85■□□□□ 0.93
LSM5-204ENST00000409909 FRMPD2Q68DX3 1309 aaPredicted RBP20.84■□□□□ 0.93
LSM5-204ENST00000409909 RAD50Q92878 1312 aa20.84■□□□□ 0.93
LSM5-204ENST00000409909 B4E1Z4 1266 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms