RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 TIMP1P01033 207 aa20.34■□□□□ 0.85
SCRN1-203ENST00000409570 CHGBP05060 677 aa20.34■□□□□ 0.85
SCRN1-203ENST00000409570 IFIT2P09913 472 aaKnown RBP20.34■□□□□ 0.85
SCRN1-203ENST00000409570 MSL3Q8N5Y2 521 aaKnown RBP20.34■□□□□ 0.85
SCRN1-203ENST00000409570 PANK1Q8TE04 598 aa20.34■□□□□ 0.85
SCRN1-203ENST00000409570 NUP133Q8WUM0 1156 aa20.34■□□□□ 0.85
SCRN1-203ENST00000409570 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.85
SCRN1-203ENST00000409570 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.34■□□□□ 0.85
SCRN1-203ENST00000409570 TBX21Q9UL17 535 aa20.34■□□□□ 0.85
SCRN1-203ENST00000409570 CHD9Q3L8U1 2897 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 SYNGAP1Q96PV0 1343 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 MYADML2A6NDP7 307 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 RAD21O60216 631 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 KCNA10Q16322 511 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 TJAP1Q5JTD0 557 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 MAMDC4Q6UXC1 1216 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 AMOTL1Q8IY63 956 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 TIFAQ96CG3 184 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 FAM184BQ9ULE4 1060 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 RIPK3Q9Y572 518 aa20.33■□□□□ 0.85
SCRN1-203ENST00000409570 DNAJC25-GNG10A0A024R161 153 aa20.32■□□□□ 0.84
SCRN1-203ENST00000409570 IRX5P78411 483 aaPredicted RBP20.32■□□□□ 0.84
SCRN1-203ENST00000409570 MFSD5Q6N075 450 aa20.32■□□□□ 0.84
SCRN1-203ENST00000409570 CTR9Q6PD62 1173 aa20.32■□□□□ 0.84
SCRN1-203ENST00000409570 C16orf59Q7L2K0 433 aa20.32■□□□□ 0.84
SCRN1-203ENST00000409570 DUSP11O75319 330 aaKnown RBP20.31■□□□□ 0.84
SCRN1-203ENST00000409570 CDK7P50613 346 aa20.31■□□□□ 0.84
SCRN1-203ENST00000409570 UBE3CQ15386 1083 aa20.31■□□□□ 0.84
SCRN1-203ENST00000409570 TMEM240Q5SV17 173 aa20.31■□□□□ 0.84
SCRN1-203ENST00000409570 SNRNP48Q6IEG0 339 aaKnown RBP20.31■□□□□ 0.84
SCRN1-203ENST00000409570 NUP88Q99567 741 aaPredicted RBP20.31■□□□□ 0.84
SCRN1-203ENST00000409570 SLF1Q9BQI6 1058 aa20.31■□□□□ 0.84
SCRN1-203ENST00000409570 TEX13BQ9BXU2 312 aa20.31■□□□□ 0.84
SCRN1-203ENST00000409570 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.31■□□□□ 0.84
SCRN1-203ENST00000409570 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
SCRN1-203ENST00000409570 ZHX1Q9UKY1 873 aaPredicted RBP20.31■□□□□ 0.84
SCRN1-203ENST00000409570 SLC4A4Q9Y6R1 1079 aa20.31■□□□□ 0.84
SCRN1-203ENST00000409570 ADCY6O43306 1168 aa20.3■□□□□ 0.84
SCRN1-203ENST00000409570 ATP5JP18859 108 aa20.3■□□□□ 0.84
SCRN1-203ENST00000409570 CST5P28325 142 aaPredicted RBP20.3■□□□□ 0.84
SCRN1-203ENST00000409570 RASIP1Q5U651 963 aa20.3■□□□□ 0.84
SCRN1-203ENST00000409570 DDX11Q96FC9 970 aa20.3■□□□□ 0.84
SCRN1-203ENST00000409570 DDRGK1Q96HY6 314 aa20.3■□□□□ 0.84
SCRN1-203ENST00000409570 HAUS7Q99871 368 aa20.3■□□□□ 0.84
SCRN1-203ENST00000409570 ELP1O95163 1332 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 MROH7Q68CQ1 1323 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 GRXCR1A8MXD5 290 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 PBX2P40425 430 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 PPIGQ13427 754 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCRN1-203ENST00000409570 ZNF467Q7Z7K2 595 aaPredicted RBP20.29■□□□□ 0.84
SCRN1-203ENST00000409570 SIRT2Q8IXJ6 389 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 FGD4Q96M96 766 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 PBX4Q9BYU1 374 aa20.29■□□□□ 0.84
SCRN1-203ENST00000409570 TNFRSF10AO00220 468 aa20.28■□□□□ 0.84
SCRN1-203ENST00000409570 ASGR1P07306 291 aa20.28■□□□□ 0.84
SCRN1-203ENST00000409570 C6orf222P0C671 652 aaPredicted RBP20.28■□□□□ 0.84
SCRN1-203ENST00000409570 RASA1P20936 1047 aa20.28■□□□□ 0.84
SCRN1-203ENST00000409570 ACVR2BQ13705 512 aa20.28■□□□□ 0.84
SCRN1-203ENST00000409570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCRN1-203ENST00000409570 RPAP2Q8IXW5 612 aaPredicted RBP20.28■□□□□ 0.84
SCRN1-203ENST00000409570 PUS7LQ9H0K6 701 aaKnown RBP20.28■□□□□ 0.84
SCRN1-203ENST00000409570 UPF3AQ9H1J1 476 aaKnown RBP20.28■□□□□ 0.84
SCRN1-203ENST00000409570 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.28■□□□□ 0.84
SCRN1-203ENST00000409570 CHD7Q9P2D1 2997 aa20.28■□□□□ 0.84
SCRN1-203ENST00000409570 F5H6K3 240 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 ARVCFO00192 962 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 ATP2A1O14983 1001 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 RAB11FIP3O75154 756 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 NDUFB10O96000 172 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 CSF2RAP15509 400 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 GJA9P57773 515 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 KLRC3Q07444 240 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 PRPF38AQ8NAV1 312 aaKnown RBP20.27■□□□□ 0.84
SCRN1-203ENST00000409570 PCSK9Q8NBP7 692 aaKnown RBP20.27■□□□□ 0.84
SCRN1-203ENST00000409570 GAS2L1Q99501 681 aaPredicted RBP20.27■□□□□ 0.84
SCRN1-203ENST00000409570 NYAP2Q9P242 653 aa20.27■□□□□ 0.84
SCRN1-203ENST00000409570 ARPP21Q9UBL0 812 aaPredicted RBP20.27■□□□□ 0.84
SCRN1-203ENST00000409570 A0A0U1RQG5 324 aaPredicted RBP20.26■□□□□ 0.83
SCRN1-203ENST00000409570 HMMRO75330 724 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 ACRP10323 421 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 SLC4A3P48751 1232 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 CCDC144BQ3MJ40 725 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 CCDC174Q6PII3 467 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 CCDC129Q6ZRS4 1044 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 ZNF365Q70YC5 407 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 FAM126BQ8IXS8 530 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 CPXCR1Q8N123 301 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 ABHD16BQ9H3Z7 469 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 PRDM12Q9H4Q4 367 aa20.26■□□□□ 0.83
SCRN1-203ENST00000409570 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
SCRN1-203ENST00000409570 CTAGE5O15320 804 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 SBK1Q52WX2 424 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 AKNAD1Q5T1N1 836 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 TMEM199Q8N511 208 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 PPM1EQ8WY54 764 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 VTI1AQ96AJ9 217 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 PPP1R12CQ9BZL4 782 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms