RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
AP1S3-204ENST00000409375 SLF1Q9BQI6 1058 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 PNMA3Q9UL41 463 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 CTDP1Q9Y5B0 961 aaPredicted RBP17.71■□□□□ 0.43
AP1S3-204ENST00000409375 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 RASSF10A6NK89 507 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 FLOT1O75955 427 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 FMNL1O95466 1100 aaPredicted RBP17.7■□□□□ 0.42
AP1S3-204ENST00000409375 OSBPP22059 807 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
AP1S3-204ENST00000409375 IRX3P78415 501 aaPredicted RBP17.7■□□□□ 0.42
AP1S3-204ENST00000409375 SREBF2Q12772 1141 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 NTRK3Q16288 839 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 KIAA1755Q5JYT7 1200 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 NSUN7Q8NE18 718 aaKnown RBP17.7■□□□□ 0.42
AP1S3-204ENST00000409375 RIOX1Q9H6W3 641 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 PNMA2Q9UL42 364 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
AP1S3-204ENST00000409375 PRPF3O43395 683 aaKnown RBP17.69■□□□□ 0.42
AP1S3-204ENST00000409375 DEXIO95424 95 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 MKRN3Q13064 507 aaKnown RBP17.69■□□□□ 0.42
AP1S3-204ENST00000409375 NOGQ13253 232 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 COG2Q14746 738 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 OTUD7BQ6GQQ9 843 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 CATSPERGQ6ZRH7 1159 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 RASGRP2Q7LDG7 609 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 ANKRD23Q86SG2 305 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 SRBD1Q8N5C6 995 aaKnown RBP17.69■□□□□ 0.42
AP1S3-204ENST00000409375 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 UBA5Q9GZZ9 404 aa17.69■□□□□ 0.42
AP1S3-204ENST00000409375 MYH6P13533 1939 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 hCG_1984214I3L0E3 225 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 PDIA4P13667 645 aaKnown RBP17.68■□□□□ 0.42
AP1S3-204ENST00000409375 XBP1P17861 261 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 PDCP20941 246 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 SLC16A2P36021 539 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 REM2Q8IYK8 340 aaPredicted RBP17.68■□□□□ 0.42
AP1S3-204ENST00000409375 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 ZNF713Q8N859 430 aaPredicted RBP17.68■□□□□ 0.42
AP1S3-204ENST00000409375 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 GTF3C2Q8WUA4 911 aaPredicted RBP17.68■□□□□ 0.42
AP1S3-204ENST00000409375 PHKBQ93100 1093 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 MS4A4AQ96JQ5 239 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 CWC22Q9HCG8 908 aaKnown RBP17.68■□□□□ 0.42
AP1S3-204ENST00000409375 VAT1LQ9HCJ6 419 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 ZCCHC17Q9NP64 241 aaKnown RBP17.68■□□□□ 0.42
AP1S3-204ENST00000409375 ORC3Q9UBD5 711 aaPredicted RBP17.68■□□□□ 0.42
AP1S3-204ENST00000409375 PPP1R9AQ9ULJ8 1098 aa17.68■□□□□ 0.42
AP1S3-204ENST00000409375 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
AP1S3-204ENST00000409375 ZBED4O75132 1171 aa17.67■□□□□ 0.42
AP1S3-204ENST00000409375 FUT2Q10981 343 aa17.67■□□□□ 0.42
AP1S3-204ENST00000409375 DGKZQ13574 1117 aa17.67■□□□□ 0.42
AP1S3-204ENST00000409375 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
AP1S3-204ENST00000409375 PRR12Q9ULL5 1215 aa17.67■□□□□ 0.42
AP1S3-204ENST00000409375 V9GY48 417 aaPredicted RBP17.67■□□□□ 0.42
AP1S3-204ENST00000409375 PNMA6FA0A0J9YX94 578 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 FAM155AB1AL88 458 aaPredicted RBP17.66■□□□□ 0.42
AP1S3-204ENST00000409375 ZBTB5O15062 677 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 CTDNEP1O95476 244 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 GJB2P29033 226 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 DSG3P32926 999 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 GRM1Q13255 1194 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 TREML2Q5T2D2 321 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
AP1S3-204ENST00000409375 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 MB21D1Q8N884 522 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 CCDC12Q8WUD4 166 aaPredicted RBP17.66■□□□□ 0.42
AP1S3-204ENST00000409375 BRI3BPQ8WY22 251 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 DDX11Q96FC9 970 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 CAPNS2Q96L46 248 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 JMJD4Q9H9V9 463 aa17.66■□□□□ 0.42
AP1S3-204ENST00000409375 CYTH3O43739 400 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 JAK2O60674 1132 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 MOGSQ13724 837 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 TRIM29Q14134 588 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 CDC37Q16543 378 aaPredicted RBP17.65■□□□□ 0.42
AP1S3-204ENST00000409375 CYP4F22Q6NT55 531 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 FAM177A1Q8N128 213 aaPredicted RBP17.65■□□□□ 0.42
AP1S3-204ENST00000409375 SPRYD3Q8NCJ5 442 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 PIGSQ96S52 555 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 PARK7Q99497 189 aaKnown RBP17.65■□□□□ 0.42
AP1S3-204ENST00000409375 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
AP1S3-204ENST00000409375 CPVLQ9H3G5 476 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 FBXO28Q9NVF7 368 aa17.65■□□□□ 0.42
AP1S3-204ENST00000409375 PARP14Q460N5 1801 aa17.64■□□□□ 0.41
AP1S3-204ENST00000409375 PDHXO00330 501 aa17.64■□□□□ 0.41
AP1S3-204ENST00000409375 SCG2P13521 617 aa17.64■□□□□ 0.41
AP1S3-204ENST00000409375 DDIT3P35638 169 aa17.64■□□□□ 0.41
AP1S3-204ENST00000409375 PFKFB3Q16875 520 aaPredicted RBP17.64■□□□□ 0.41
AP1S3-204ENST00000409375 LBX2Q6XYB7 198 aa17.64■□□□□ 0.41
AP1S3-204ENST00000409375 CCDC148Q8NFR7 591 aa17.64■□□□□ 0.41
AP1S3-204ENST00000409375 SMCR8Q8TEV9 937 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms