RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
SNORD88A-201ENST00000408314 A0A0D9SFI3 127 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 KBTBD13C9JR72 458 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 DNM1LO00429 736 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 SEPT4O43236 478 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 PLA2G6O60733 806 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 HSPD1P10809 573 aaKnown RBP10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 SDSP20132 328 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 CYP2C19P33261 490 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 CTDSPL2Q05D32 466 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 CCDC178Q5BJE1 867 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 FAM47AQ5JRC9 791 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 RCSD1Q6JBY9 416 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 MFSD6Q6ZSS7 791 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 LRRC47Q8N1G4 583 aaKnown RBP10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 CHST13Q8NET6 341 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 REPS2Q8NFH8 660 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 NPLOC4Q8TAT6 608 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 MAML3Q96JK9 1138 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 FAM227BQ96M60 508 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 NUP88Q99567 741 aaPredicted RBP10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 SLC38A10Q9HBR0 1119 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 FLRT1Q9NZU1 646 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 CTNNA3Q9UI47 895 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 CNPY2Q9Y2B0 182 aa10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
SNORD88A-201ENST00000408314 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 TMEM232C9JQI7 657 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 FGAP02671 866 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 FGRP09769 529 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 VPS53Q5VIR6 699 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 LHX8Q68G74 356 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 ZNF467Q7Z7K2 595 aaPredicted RBP10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 DIS3LQ8TF46 1054 aaKnown RBP10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 STAG1Q8WVM7 1258 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 ESR2Q92731 530 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 TINF2Q9BSI4 451 aa10.72□□□□□ -0.69
SNORD88A-201ENST00000408314 ZNF213O14771 459 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 FOXP2O15409 715 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 COBLO75128 1261 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 IGHA2P01877 340 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 IGHDP01880 384 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 RARBP10826 455 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 TOP1P11387 765 aaKnown RBP10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 COL6A1P12109 1028 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 ZNF792Q3KQV3 632 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 RRP12Q5JTH9 1297 aaKnown RBP10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 FRMPD3Q5JV73 1810 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 AKNAD1Q5T1N1 836 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 C7orf61Q8IZ16 206 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 CPXCR1Q8N123 301 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 RUFY2Q8WXA3 655 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 RAD50Q92878 1312 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 TTC14Q96N46 770 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 SYNGAP1Q96PV0 1343 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 ACAD9Q9H845 621 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 TCP11L1Q9NUJ3 509 aa10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
SNORD88A-201ENST00000408314 PFASO15067 1338 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 AKR1A1P14550 325 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 MCCP23508 829 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 NOVP48745 357 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 IMMTQ16891 758 aaKnown RBP10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 CWC27Q6UX04 472 aaKnown RBP10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 ZNF589Q86UQ0 364 aaPredicted RBP10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 DSCC1Q9BVC3 393 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 CNNM2Q9H8M5 875 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
SNORD88A-201ENST00000408314 PGK2P07205 417 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 SLC4A3P48751 1232 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 MNX1P50219 401 aaPredicted RBP10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 RNF180Q86T96 592 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 TRPV1Q8NER1 839 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 IL17RBQ9NRM6 502 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 PCDH10Q9P2E7 1040 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 PLXNA1Q9UIW2 1896 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 LAMA4Q16363 1823 aa10.69□□□□□ -0.7
SNORD88A-201ENST00000408314 ZNFX1Q9P2E3 1918 aaKnown RBP10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 DNAJC25-GNG10A0A024R161 153 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 ASB14A6NK59 587 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 HAND2P61296 217 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 GPATCH4Q5T3I0 446 aaKnown RBP10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 TTC22Q5TAA0 569 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 MAMDC4Q6UXC1 1216 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 KCTD1Q719H9 257 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 DGKHQ86XP1 1220 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 MPHOSPH6Q99547 160 aaKnown RBP10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 KRT23Q9C075 422 aa10.68□□□□□ -0.7
SNORD88A-201ENST00000408314 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms