RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 NAP1L4Q99733 375 aaKnown RBP11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 GZF1Q9H116 711 aaPredicted RBP11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 JMJD4Q9H9V9 463 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 ZNF112Q9UJU3 913 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 PCDHA7Q9UN72 937 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 CLIC4Q9Y696 253 aa11.82□□□□□ -0.52
SNORD88C-201ENST00000408061 CCDC194A0A1B0GVG4 234 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 FSD2A1L4K1 749 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 SMCO2A6NFE2 343 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 FAM196BA6NMK8 535 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 M0R2N6 131 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 GDF11O95390 407 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 CAVIN2O95810 425 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 GOLGA8HP0CJ92 632 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 FDX1P10109 184 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 MRE11P49959 708 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 CEBPZQ03701 1054 aaKnown RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 FAM160A1Q05DH4 1040 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 NR5A1Q13285 461 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 ARL6IP4Q66PJ3 421 aaKnown RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 WWC2Q6AWC2 1192 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 HEATR3Q7Z4Q2 680 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 ELOA2Q8IYF1 753 aaPredicted RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 TIGD1Q96MW7 591 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 PIGSQ96S52 555 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 PYM1Q9BRP8 204 aaKnown RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 VCPKMTQ9H867 229 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 GPCPD1Q9NPB8 672 aa11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 SRPRBQ9Y5M8 271 aaKnown RBP11.81□□□□□ -0.52
SNORD88C-201ENST00000408061 UBE2Q2LH0YL09 131 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 KINO60870 393 aaKnown RBP11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 NDUFB10O96000 172 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 PTPREP23469 700 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 TOB1P50616 345 aaPredicted RBP11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 USP14P54578 494 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 SLC35G1Q2M3R5 365 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 AXDND1Q5T1B0 1012 aaPredicted RBP11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 C9orf131Q5VYM1 1079 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 USP50Q70EL3 339 aaPredicted RBP11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 CCDC34Q96HJ3 373 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 WDR18Q9BV38 432 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 KIAA1683Q9H0B3 1180 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 NUP62CLQ9H1M0 184 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 VAT1LQ9HCJ6 419 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 FEM1BQ9UK73 627 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 MTMR7Q9Y216 660 aa11.8□□□□□ -0.52
SNORD88C-201ENST00000408061 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 STAT2P52630 851 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 TTC38Q5R3I4 469 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 SYDE2Q5VT97 1194 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 ANGEL2Q5VTE6 544 aaKnown RBP11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 RBM43Q6ZSC3 357 aaKnown RBP11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 SAMD3Q8N6K7 520 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 ENGASEQ8NFI3 743 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 AMNQ9BXJ7 453 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 CLSTN2Q9H4D0 955 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 DACT1Q9NYF0 836 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 FAM13BQ9NYF5 915 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 HOOK1Q9UJC3 728 aaKnown RBP11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 FRMPD2Q68DX3 1309 aaPredicted RBP11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 ATAD5Q96QE3 1844 aa11.79□□□□□ -0.52
SNORD88C-201ENST00000408061 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 WDR46O15213 610 aaKnown RBP11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 EGFRP00533 1210 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 FOSP01100 380 aaPredicted RBP11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 LIG1P18858 919 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 PRPHP41219 470 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 EPS15P42566 896 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 ADCY7P51828 1080 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 NOL9Q5SY16 702 aaKnown RBP11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 RESP18Q5W5W9 173 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 KANK3Q6NY19 840 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 KCTD1Q719H9 257 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 ILDR2Q71H61 639 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 MIGA2Q7L4E1 593 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 FSIP1Q8NA03 581 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 CUL5Q93034 780 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 MAF1Q9H063 256 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 TNMDQ9H2S6 317 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms