RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 ALG1Q9BT22 464 aa18.28■□□□□ 0.52
LSP1-204ENST00000406638 NAPBQ9H115 298 aa18.28■□□□□ 0.52
LSP1-204ENST00000406638 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
LSP1-204ENST00000406638 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
LSP1-204ENST00000406638 FAM169AQ9Y6X4 670 aa18.28■□□□□ 0.52
LSP1-204ENST00000406638 RIMBP2O15034 1052 aa18.27■□□□□ 0.52
LSP1-204ENST00000406638 TUBB2AQ13885 445 aa18.27■□□□□ 0.52
LSP1-204ENST00000406638 MAP3K14Q99558 947 aa18.27■□□□□ 0.52
LSP1-204ENST00000406638 TUBB2BQ9BVA1 445 aa18.27■□□□□ 0.52
LSP1-204ENST00000406638 AATFQ9NY61 560 aaKnown RBP eCLIP18.27■□□□□ 0.52
LSP1-204ENST00000406638 MYO6Q9UM54 1294 aa18.27■□□□□ 0.52
LSP1-204ENST00000406638 CCDC172P0C7W6 258 aa18.27■□□□□ 0.51
LSP1-204ENST00000406638 POSTNQ15063 836 aa18.27■□□□□ 0.51
LSP1-204ENST00000406638 DIXDC1Q155Q3 683 aa18.27■□□□□ 0.51
LSP1-204ENST00000406638 KRT40Q6A162 431 aa18.27■□□□□ 0.51
LSP1-204ENST00000406638 KLHL10Q6JEL2 608 aa18.27■□□□□ 0.51
LSP1-204ENST00000406638 WDR93Q6P2C0 686 aa18.27■□□□□ 0.51
LSP1-204ENST00000406638 CCDC148Q8NFR7 591 aa18.27■□□□□ 0.51
LSP1-204ENST00000406638 TNS1Q9HBL0 1735 aaKnown RBP18.27■□□□□ 0.51
LSP1-204ENST00000406638 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 A0A1B0GTH6 734 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 TDO2P48775 406 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 AARSP49588 968 aaKnown RBP eCLIP18.26■□□□□ 0.51
LSP1-204ENST00000406638 STX17P56962 302 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 KCNV1Q6PIU1 500 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 HINFPQ9BQA5 517 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 CACNA1SQ13698 1873 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 EBAG9O00559 213 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 POLR2DO15514 142 aaKnown RBP18.26■□□□□ 0.51
LSP1-204ENST00000406638 GRIN1Q05586 938 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 STIM1Q13586 685 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 RRP12Q5JTH9 1297 aaKnown RBP18.26■□□□□ 0.51
LSP1-204ENST00000406638 GSPT2Q8IYD1 628 aaKnown RBP18.26■□□□□ 0.51
LSP1-204ENST00000406638 CTCFLQ8NI51 663 aaPredicted RBP18.26■□□□□ 0.51
LSP1-204ENST00000406638 PHKBQ93100 1093 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 SERTAD1Q9UHV2 236 aa18.26■□□□□ 0.51
LSP1-204ENST00000406638 MINDY4BA8MYZ0 360 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 C6orf229H3BNL8 230 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 ENC1O14682 589 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 SRGNP10124 158 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 FXR1P51114 621 aaKnown RBP eCLIP18.25■□□□□ 0.51
LSP1-204ENST00000406638 MLKLQ8NB16 471 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 NAA15Q9BXJ9 866 aaKnown RBP18.25■□□□□ 0.51
LSP1-204ENST00000406638 FAM237AA0A1B0GTK4 181 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 HOXA10P31260 410 aaPredicted RBP18.25■□□□□ 0.51
LSP1-204ENST00000406638 IRAK1P51617 712 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 TTC19Q6DKK2 380 aaPredicted RBP18.25■□□□□ 0.51
LSP1-204ENST00000406638 ANKRD31Q8N7Z5 1873 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 NCOA7Q8NI08 942 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 TBC1D16Q8TBP0 767 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 VIPAS39Q9H9C1 493 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 CEP83Q9Y592 693 aa18.25■□□□□ 0.51
LSP1-204ENST00000406638 KLRG2A4D1S0 409 aaPredicted RBP18.24■□□□□ 0.51
LSP1-204ENST00000406638 MFAP3LO75121 409 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 TUBBP07437 444 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 CHRNA5P30532 468 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 SLC15A2Q16348 729 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 RALYLQ86SE5 291 aaKnown RBP18.24■□□□□ 0.51
LSP1-204ENST00000406638 MYL10Q9BUA6 226 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 FAM107BQ9H098 131 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 GGA1Q9UJY5 639 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 PPEF1O14829 653 aaPredicted RBP18.24■□□□□ 0.51
LSP1-204ENST00000406638 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
LSP1-204ENST00000406638 BRIP1Q9BX63 1249 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 TRIM10Q9UDY6 481 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 TTF2Q9UNY4 1162 aaKnown RBP18.24■□□□□ 0.51
LSP1-204ENST00000406638 LEMD3Q9Y2U8 911 aa18.24■□□□□ 0.51
LSP1-204ENST00000406638 ZC3H4Q9UPT8 1303 aaKnown RBP18.24■□□□□ 0.51
LSP1-204ENST00000406638 UBE2Q2LH0YL09 131 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 SRGAP2O75044 1071 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 MORC3Q14149 939 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 APTXQ7Z2E3 356 aaKnown RBP18.23■□□□□ 0.51
LSP1-204ENST00000406638 BANK1Q8NDB2 785 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 FAM76AQ8TAV0 307 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 BCAS4Q8TDM0 211 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 COG1Q8WTW3 980 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 SLF1Q9BQI6 1058 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 MXD3Q9BW11 206 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 PRDM1O75626 825 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 ARHGAP25P42331 645 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 USP14P54578 494 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 AMPD2Q01433 879 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 CRACR2AQ9BSW2 395 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 CD209Q9NNX6 404 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 DACH1Q9UI36 760 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 GUCA1BQ9UMX6 200 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
LSP1-204ENST00000406638 COBLO75128 1261 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 GYPCP04921 128 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 CYP2D6P10635 497 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 CDC25AP30304 524 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 ERVK-24P63145 666 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 KRI1Q8N9T8 703 aaKnown RBP18.22■□□□□ 0.51
LSP1-204ENST00000406638 MMS19Q96T76 1030 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 MYH13Q9UKX3 1938 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 GOLGA6CA6NDK9 693 aa18.22■□□□□ 0.51
LSP1-204ENST00000406638 AGPSO00116 658 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms