RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 UNC80Q8N2C7 3258 aa25.22■■□□□ 1.63
RHBDD3-202ENST00000406335 SNRNP48Q6IEG0 339 aaKnown RBP25.22■■□□□ 1.63
RHBDD3-202ENST00000406335 HAUS7Q99871 368 aa25.22■■□□□ 1.63
RHBDD3-202ENST00000406335 SLF1Q9BQI6 1058 aa25.22■■□□□ 1.63
RHBDD3-202ENST00000406335 SPC25Q9HBM1 224 aa25.22■■□□□ 1.63
RHBDD3-202ENST00000406335 FAAP100Q0VG06 881 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 UBE3CQ15386 1083 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 KCNA10Q16322 511 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 CTR9Q6PD62 1173 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 CCDC174Q6PII3 467 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 CCDC129Q6ZRS4 1044 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 CPXCR1Q8N123 301 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 GLT1D1Q96MS3 346 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 TOX2Q96NM4 488 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 NUP88Q99567 741 aaPredicted RBP25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 TEX13BQ9BXU2 312 aa25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 ZNF214Q9UL59 606 aaPredicted RBP25.21■■□□□ 1.63
RHBDD3-202ENST00000406335 MOXD2PA6NHM9 499 aa25.2■■□□□ 1.62
RHBDD3-202ENST00000406335 ZBED4O75132 1171 aa25.2■■□□□ 1.62
RHBDD3-202ENST00000406335 DNAJB2P25686 324 aa25.2■■□□□ 1.62
RHBDD3-202ENST00000406335 GRIN2CQ14957 1233 aa25.2■■□□□ 1.62
RHBDD3-202ENST00000406335 MSL3Q8N5Y2 521 aaKnown RBP25.2■■□□□ 1.62
RHBDD3-202ENST00000406335 LTBP2Q14767 1821 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 SYNRGQ9UMZ2 1314 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 ADAMTS4O75173 837 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 TIMP1P01033 207 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 C6orf222P0C671 652 aaPredicted RBP25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 ANKRD33Q7Z3H0 272 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 PPM1EQ8WY54 764 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 ZNF576Q9H609 170 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 ARPP21Q9UBL0 812 aaPredicted RBP25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 RLFQ13129 1914 aa25.19■■□□□ 1.62
RHBDD3-202ENST00000406335 MINDY4BA8MYZ0 360 aa25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 CHGBP05060 677 aa25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 TSHZ3Q63HK5 1081 aa25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 ANKRD35Q8N283 1001 aa25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 PRPF38AQ8NAV1 312 aaKnown RBP25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 PCSK9Q8NBP7 692 aaKnown RBP25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 KIFC2Q96AC6 838 aa25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 TIFAQ96CG3 184 aa25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 PRDM6Q9NQX0 595 aa25.18■■□□□ 1.62
RHBDD3-202ENST00000406335 MROH7Q68CQ1 1323 aa25.17■■□□□ 1.62
RHBDD3-202ENST00000406335 SYNGAP1Q96PV0 1343 aa25.17■■□□□ 1.62
RHBDD3-202ENST00000406335 F5H6K3 240 aa25.17■■□□□ 1.62
RHBDD3-202ENST00000406335 KLRC3Q07444 240 aa25.17■■□□□ 1.62
RHBDD3-202ENST00000406335 PPIGQ13427 754 aaKnown RBP eCLIP25.17■■□□□ 1.624e-6■□□□□ 10.7
RHBDD3-202ENST00000406335 REPS2Q8NFH8 660 aa25.17■■□□□ 1.62
RHBDD3-202ENST00000406335 PUS7LQ9H0K6 701 aaKnown RBP25.17■■□□□ 1.62
RHBDD3-202ENST00000406335 ISY1Q9ULR0 285 aaKnown RBP25.17■■□□□ 1.62
RHBDD3-202ENST00000406335 A0A0G2JMZ2 1700 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 DUSP11O75319 330 aaKnown RBP25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 SNAI1O95863 264 aaPredicted RBP25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 ACVR2BQ13705 512 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 MFSD5Q6N075 450 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 TMEM199Q8N511 208 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 GAS2L1Q99501 681 aaPredicted RBP25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 ECHDC1Q9NTX5 307 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 CLIP2Q9UDT6 1046 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 RIPK3Q9Y572 518 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 CUL9Q8IWT3 2517 aa25.16■■□□□ 1.62
RHBDD3-202ENST00000406335 TLR3O15455 904 aaKnown RBP25.15■■□□□ 1.62
RHBDD3-202ENST00000406335 GNASQ5JWF2 1037 aa25.15■■□□□ 1.62
RHBDD3-202ENST00000406335 NOL8Q76FK4 1167 aaKnown RBP25.15■■□□□ 1.62
RHBDD3-202ENST00000406335 ZNF444Q8N0Y2 327 aaPredicted RBP25.15■■□□□ 1.62
RHBDD3-202ENST00000406335 KLHDC9Q8NEP7 349 aa25.15■■□□□ 1.62
RHBDD3-202ENST00000406335 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.15■■□□□ 1.62
RHBDD3-202ENST00000406335 RAVER2Q9HCJ3 691 aaKnown RBP25.15■■□□□ 1.62
RHBDD3-202ENST00000406335 ASGR1P07306 291 aa25.14■■□□□ 1.62
RHBDD3-202ENST00000406335 TJAP1Q5JTD0 557 aa25.14■■□□□ 1.62
RHBDD3-202ENST00000406335 MAMDC4Q6UXC1 1216 aa25.14■■□□□ 1.62
RHBDD3-202ENST00000406335 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.14■■□□□ 1.62
RHBDD3-202ENST00000406335 NYAP2Q9P242 653 aa25.14■■□□□ 1.62
RHBDD3-202ENST00000406335 ROBO3Q96MS0 1386 aa25.14■■□□□ 1.61
RHBDD3-202ENST00000406335 ELP1O95163 1332 aa25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 MYADML2A6NDP7 307 aa25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 NDUFB10O96000 172 aa25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 PPP1R12CQ9BZL4 782 aa25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 ABHD16BQ9H3Z7 469 aa25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 ZNF287Q9HBT7 754 aa25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 FBXO40Q9UH90 709 aa25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 LAMA2P24043 3122 aaKnown RBP25.13■■□□□ 1.61
RHBDD3-202ENST00000406335 A0A0U1RQG5 324 aaPredicted RBP25.12■■□□□ 1.61
RHBDD3-202ENST00000406335 APPP05067 770 aa25.12■■□□□ 1.61
RHBDD3-202ENST00000406335 CCDC144BQ3MJ40 725 aa25.12■■□□□ 1.61
RHBDD3-202ENST00000406335 ZNF467Q7Z7K2 595 aaPredicted RBP25.12■■□□□ 1.61
RHBDD3-202ENST00000406335 OTUD7AQ8TE49 926 aaPredicted RBP25.12■■□□□ 1.61
RHBDD3-202ENST00000406335 ARVCFO00192 962 aa25.11■■□□□ 1.61
RHBDD3-202ENST00000406335 ACRP10323 421 aa25.11■■□□□ 1.61
RHBDD3-202ENST00000406335 CSF2RAP15509 400 aa25.11■■□□□ 1.61
RHBDD3-202ENST00000406335 RASA1P20936 1047 aa25.11■■□□□ 1.61
RHBDD3-202ENST00000406335 GPATCH3Q96I76 525 aa25.11■■□□□ 1.61
RHBDD3-202ENST00000406335 STRBPQ96SI9 672 aaKnown RBP25.11■■□□□ 1.61
RHBDD3-202ENST00000406335 TBX21Q9UL17 535 aa25.11■■□□□ 1.61
RHBDD3-202ENST00000406335 DNAJC25-GNG10A0A024R161 153 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 GRXCR1A8MXD5 290 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 TDO2P48775 406 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 IRX5P78411 483 aaPredicted RBP25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 SBK1Q52WX2 424 aa25.1■■□□□ 1.61
RHBDD3-202ENST00000406335 CCSAPQ6IQ19 270 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms