RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 FOXP4Q8IVH2 680 aaPredicted RBP10.57□□□□□ -0.72
CBX1-203ENST00000402583 VSTM4Q8IW00 320 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 NLGN1Q8N2Q7 840 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 ZNF713Q8N859 430 aaPredicted RBP10.57□□□□□ -0.72
CBX1-203ENST00000402583 FLAD1Q8NFF5 587 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 SHISA4Q96DD7 197 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 C16orf45Q96MC5 204 aaPredicted RBP10.57□□□□□ -0.72
CBX1-203ENST00000402583 TMEM47Q9BQJ4 181 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 SPZ1Q9BXG8 430 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 FANCLQ9NW38 375 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
CBX1-203ENST00000402583 ATP6V0A2Q9Y487 856 aa10.57□□□□□ -0.72
CBX1-203ENST00000402583 USP17L3A6NCW0 530 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 USP17L4A6NCW7 530 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 FOXN1O15353 648 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 NPR1P16066 1061 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 GNA11P29992 359 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 ALDH1B1P30837 517 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 PDE6BP35913 854 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 DDR1Q08345 913 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
CBX1-203ENST00000402583 SYCP1Q15431 976 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 USP17L1Q7RTZ2 530 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 KRT25Q7Z3Z0 450 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 HEATR3Q7Z4Q2 680 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 FCHSD1Q86WN1 690 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 CCAR2Q8N163 923 aaKnown RBP10.56□□□□□ -0.72
CBX1-203ENST00000402583 RRP36Q96EU6 259 aaKnown RBP10.56□□□□□ -0.72
CBX1-203ENST00000402583 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 GPR101Q96P66 508 aaPredicted RBP10.56□□□□□ -0.72
CBX1-203ENST00000402583 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 ZC3H12CQ9C0D7 883 aaKnown RBP10.56□□□□□ -0.72
CBX1-203ENST00000402583 C6orf50Q9HD87 102 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 BARHL2Q9NY43 387 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 POLLQ9UGP5 575 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
CBX1-203ENST00000402583 NFE2L3Q9Y4A8 694 aa10.56□□□□□ -0.72
CBX1-203ENST00000402583 NAV1Q8NEY1 1877 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 KLRF2D3W0D1 207 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 G3V3G9 751 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 STXBP3O00186 592 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 MYL1P05976 194 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 ATP1A3P13637 1013 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 MCM7P33993 719 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 PRPHP41219 470 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 AFMP43652 599 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 DPYDQ12882 1025 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 ARID5BQ14865 1188 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 GRIK5Q16478 980 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 TXNRD1Q16881 649 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 SLC4A8Q2Y0W8 1093 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 FILIP1LQ4L180 1135 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 SPATA1Q5VX52 437 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 ARMCX5Q6P1M9 558 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 DTHD1Q6ZMT9 781 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 USP49Q70CQ1 688 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 GTPBP4Q9BZE4 634 aaKnown RBP10.55□□□□□ -0.72
CBX1-203ENST00000402583 HSD3B7Q9H2F3 369 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 SWAP70Q9UH65 585 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 UBR3Q6ZT12 1888 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 MYO3BQ8WXR4 1341 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 SYNRGQ9UMZ2 1314 aa10.55□□□□□ -0.72
CBX1-203ENST00000402583 BAZ2AQ9UIF9 1905 aaKnown RBP10.54□□□□□ -0.72
CBX1-203ENST00000402583 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 ZSCAN12O43309 604 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 TRIM37O94972 964 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 ZNF18P17022 549 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 BMP6P22004 513 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 NAPAP54920 295 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 RHBDL3P58872 404 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 GTF2IP78347 998 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 SPECC1LQ69YQ0 1117 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 WWC2Q6AWC2 1192 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 NYAP1Q6ZVC0 841 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 GRAMD1CQ8IYS0 662 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 ANKRD20A12PQ8NF67 263 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 RASSF8Q8NHQ8 419 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 KIF18AQ8NI77 898 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.72
CBX1-203ENST00000402583 CCDC47Q96A33 483 aaKnown RBP10.54□□□□□ -0.72
CBX1-203ENST00000402583 AK8Q96MA6 479 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 CUEDC2Q9H467 287 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 MAGEF1Q9HAY2 307 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 PCDHA6Q9UN73 950 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 PCDHA8Q9Y5H6 950 aa10.54□□□□□ -0.72
CBX1-203ENST00000402583 LRRC37AA6NMS7 1700 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 C10orf71Q711Q0 1435 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 SNED1Q8TER0 1413 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 ESYT2A0FGR8 921 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 GOLGA6L9A6NEM1 432 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 M0R2N6 131 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 HLA-DOAP06340 250 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 STAT6P42226 847 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 NOVP48745 357 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 SPAG1Q07617 926 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 NONOQ15233 471 aaKnown RBP eCLIP10.53□□□□□ -0.72
CBX1-203ENST00000402583 E2F4Q16254 413 aa10.53□□□□□ -0.72
CBX1-203ENST00000402583 ASPRV1Q53RT3 343 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms