RNA–Protein interactions for RNA: ENST00000400824.8

AFDN-208, Transcript of afadin, adherens junction formation factor, human

TSL 5

Gene AFDN, Length 875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFDN-208	ENST00000400824	ANKRD33	Q7Z3H0	272 aa		31.52	■■■□□ 2.64
AFDN-208	ENST00000400824	TOX2	Q96NM4	488 aa		31.52	■■■□□ 2.64
AFDN-208	ENST00000400824	NUP88	Q99567	741 aa	Predicted RBP	31.52	■■■□□ 2.64
AFDN-208	ENST00000400824	TEX13B	Q9BXU2	312 aa		31.52	■■■□□ 2.64
AFDN-208	ENST00000400824	TMEM39A	Q9NV64	488 aa		31.52	■■■□□ 2.64
AFDN-208	ENST00000400824	SYNRG	Q9UMZ2	1314 aa		31.51	■■■□□ 2.64
AFDN-208	ENST00000400824	SPTBN5	Q9NRC6	3674 aa	Known RBP	31.51	■■■□□ 2.64
AFDN-208	ENST00000400824	ACLY	P53396	1101 aa		31.51	■■■□□ 2.63
AFDN-208	ENST00000400824	FAAP100	Q0VG06	881 aa		31.51	■■■□□ 2.63
AFDN-208	ENST00000400824	KLHDC9	Q8NEP7	349 aa		31.51	■■■□□ 2.63
AFDN-208	ENST00000400824	SYNGAP1	Q96PV0	1343 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	SNAI1	O95863	264 aa	Predicted RBP	31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	RASA1	P20936	1047 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	FPGS	Q05932	587 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	SBK1	Q52WX2	424 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	SNRNP48	Q6IEG0	339 aa	Known RBP	31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	MAMDC4	Q6UXC1	1216 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	STARD7	Q9NQZ5	370 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	NYAP2	Q9P242	653 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	FAM184B	Q9ULE4	1060 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	RIPK3	Q9Y572	518 aa		31.5	■■■□□ 2.63
AFDN-208	ENST00000400824	MCM3AP	O60318	1980 aa		31.49	■■■□□ 2.63
AFDN-208	ENST00000400824	DNAJC25-GNG10	A0A024R161	153 aa		31.49	■■■□□ 2.63
AFDN-208	ENST00000400824	MOXD2P	A6NHM9	499 aa		31.49	■■■□□ 2.63
AFDN-208	ENST00000400824	FOSL2	P15408	326 aa		31.49	■■■□□ 2.63
AFDN-208	ENST00000400824	CCSAP	Q6IQ19	270 aa	Predicted RBP	31.49	■■■□□ 2.63
AFDN-208	ENST00000400824	STRBP	Q96SI9	672 aa	Known RBP	31.49	■■■□□ 2.63
AFDN-208	ENST00000400824	MYH4	Q9Y623	1939 aa		31.49	■■■□□ 2.63
AFDN-208	ENST00000400824		F5H6K3	240 aa		31.48	■■■□□ 2.63
AFDN-208	ENST00000400824	KLRC3	Q07444	240 aa		31.48	■■■□□ 2.63
AFDN-208	ENST00000400824	NUP133	Q8WUM0	1156 aa		31.48	■■■□□ 2.63
AFDN-208	ENST00000400824	DDX11	Q96FC9	970 aa		31.48	■■■□□ 2.63
AFDN-208	ENST00000400824	DCDC2C	A8MYV0	355 aa		31.47	■■■□□ 2.63
AFDN-208	ENST00000400824	ATP2A1	O14983	1001 aa		31.47	■■■□□ 2.63
AFDN-208	ENST00000400824	NDUFB10	O96000	172 aa		31.47	■■■□□ 2.63
AFDN-208	ENST00000400824	KCNA10	Q16322	511 aa		31.47	■■■□□ 2.63
AFDN-208	ENST00000400824	PRPF38A	Q8NAV1	312 aa	Known RBP	31.47	■■■□□ 2.63
AFDN-208	ENST00000400824	ZNF467	Q7Z7K2	595 aa	Predicted RBP	31.46	■■■□□ 2.63
AFDN-208	ENST00000400824	ZHX1	Q9UKY1	873 aa	Predicted RBP	31.46	■■■□□ 2.63
AFDN-208	ENST00000400824	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	31.45	■■■□□ 2.63
AFDN-208	ENST00000400824	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	31.45	■■■□□ 2.63
AFDN-208	ENST00000400824	GSG1L2	A8MUP6	293 aa		31.45	■■■□□ 2.63
AFDN-208	ENST00000400824	DUSP11	O75319	330 aa	Known RBP	31.45	■■■□□ 2.63
AFDN-208	ENST00000400824	GIMAP6	Q6P9H5	292 aa		31.45	■■■□□ 2.63
AFDN-208	ENST00000400824	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	31.45	■■■□□ 2.63	2e-11	■■■■■ 37.6
AFDN-208	ENST00000400824	LRRCC1	Q9C099	1032 aa		31.45	■■■□□ 2.63
AFDN-208	ENST00000400824	MKNK2	Q9HBH9	465 aa		31.45	■■■□□ 2.63
AFDN-208	ENST00000400824	MYADML2	A6NDP7	307 aa		31.44	■■■□□ 2.62
AFDN-208	ENST00000400824	TIMP1	P01033	207 aa		31.44	■■■□□ 2.62
AFDN-208	ENST00000400824	CST5	P28325	142 aa	Predicted RBP	31.44	■■■□□ 2.62
AFDN-208	ENST00000400824	MIER1	Q8N108	512 aa		31.44	■■■□□ 2.62
AFDN-208	ENST00000400824	STK11IP	Q8N1F8	1099 aa		31.44	■■■□□ 2.62
AFDN-208	ENST00000400824	CHMP4B	Q9H444	224 aa	Known RBP	31.44	■■■□□ 2.62
AFDN-208	ENST00000400824	TBX21	Q9UL17	535 aa		31.44	■■■□□ 2.62
AFDN-208	ENST00000400824	IGKV6D-41	A0A0C4DH26	115 aa		31.43	■■■□□ 2.62
AFDN-208	ENST00000400824	ACVR2B	Q13705	512 aa		31.43	■■■□□ 2.62
AFDN-208	ENST00000400824	CPXCR1	Q8N123	301 aa		31.43	■■■□□ 2.62
AFDN-208	ENST00000400824	CLIP2	Q9UDT6	1046 aa		31.43	■■■□□ 2.62
AFDN-208	ENST00000400824	ELP1	O95163	1332 aa		31.43	■■■□□ 2.62
AFDN-208	ENST00000400824	MYO9B	Q13459	2157 aa		31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	MINDY4B	A8MYZ0	360 aa		31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	SMARCA5	O60264	1052 aa	Predicted RBP	31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	ZBED4	O75132	1171 aa		31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	DNAJB2	P25686	324 aa		31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	CDK7	P50613	346 aa		31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	IRX5	P78411	483 aa	Predicted RBP	31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	GRIN2C	Q14957	1233 aa		31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	SLC38A10	Q9HBR0	1119 aa		31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	31.42	■■■□□ 2.62
AFDN-208	ENST00000400824	ADCY6	O43306	1168 aa		31.41	■■■□□ 2.62
AFDN-208	ENST00000400824	SLC4A3	P48751	1232 aa		31.41	■■■□□ 2.62
AFDN-208	ENST00000400824	FGD4	Q96M96	766 aa		31.41	■■■□□ 2.62
AFDN-208	ENST00000400824	GLT1D1	Q96MS3	346 aa		31.41	■■■□□ 2.62
AFDN-208	ENST00000400824	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	31.41	■■■□□ 2.62	7e-23	■■■■□ 24.9
AFDN-208	ENST00000400824	RAVER2	Q9HCJ3	691 aa	Known RBP	31.41	■■■□□ 2.62
AFDN-208	ENST00000400824	ECHDC1	Q9NTX5	307 aa		31.41	■■■□□ 2.62
AFDN-208	ENST00000400824	MFSD5	Q6N075	450 aa		31.4	■■■□□ 2.62
AFDN-208	ENST00000400824	PCSK9	Q8NBP7	692 aa	Known RBP	31.4	■■■□□ 2.62
AFDN-208	ENST00000400824	OSBP2	Q969R2	916 aa		31.4	■■■□□ 2.62
AFDN-208	ENST00000400824	MKL1	Q969V6	931 aa		31.4	■■■□□ 2.62
AFDN-208	ENST00000400824	UPF3A	Q9H1J1	476 aa	Known RBP	31.4	■■■□□ 2.62
AFDN-208	ENST00000400824	ABHD16B	Q9H3Z7	469 aa		31.4	■■■□□ 2.62
AFDN-208	ENST00000400824	MROH7	Q68CQ1	1323 aa		31.4	■■■□□ 2.62
AFDN-208	ENST00000400824	ASGR1	P07306	291 aa		31.39	■■■□□ 2.62
AFDN-208	ENST00000400824	C6orf222	P0C671	652 aa	Predicted RBP	31.39	■■■□□ 2.62
AFDN-208	ENST00000400824	ANKRD35	Q8N283	1001 aa		31.39	■■■□□ 2.62
AFDN-208	ENST00000400824	KBTBD3	Q8NAB2	608 aa		31.39	■■■□□ 2.62
AFDN-208	ENST00000400824	KIFC2	Q96AC6	838 aa		31.39	■■■□□ 2.62
AFDN-208	ENST00000400824	CTDP1	Q9Y5B0	961 aa	Predicted RBP	31.39	■■■□□ 2.62
AFDN-208	ENST00000400824	GJA9	P57773	515 aa		31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	CCDC144B	Q3MJ40	725 aa		31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	C16orf59	Q7L2K0	433 aa		31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	CHST13	Q8NET6	341 aa		31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	APPBP2	Q92624	585 aa		31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	FBXO40	Q9UH90	709 aa		31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	FEM1B	Q9UK73	627 aa		31.38	■■■□□ 2.61
AFDN-208	ENST00000400824	ARMCX2	Q7L311	632 aa		31.37	■■■□□ 2.61
AFDN-208	ENST00000400824	CEP95	Q96GE4	821 aa		31.37	■■■□□ 2.61
AFDN-208	ENST00000400824	ZNF576	Q9H609	170 aa		31.37	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms