RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 OSBPP22059 807 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 CTGFP29279 349 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 TROAPQ12815 778 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 COG2Q14746 738 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 SART3Q15020 963 aaKnown RBP11.29□□□□□ -0.6
GABRB3-203ENST00000400188 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 C17orf99Q6UX52 265 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 ZNF296Q8WUU4 475 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-203ENST00000400188 BRF1Q92994 677 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
GABRB3-203ENST00000400188 SAGE1Q9NXZ1 904 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 BTBD7Q9P203 1132 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 SYNPO2Q9UMS6 1093 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 GPR25O00155 361 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 BCRP11274 1271 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 PDIA4P13667 645 aaKnown RBP11.29□□□□□ -0.6
GABRB3-203ENST00000400188 DSG3P32926 999 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 NT5C2P49902 561 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 ZNF543Q08ER8 600 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.6
GABRB3-203ENST00000400188 TOB2Q14106 344 aaPredicted RBP11.29□□□□□ -0.6
GABRB3-203ENST00000400188 PPP4R3BQ5MIZ7 849 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 NFXL1Q6ZNB6 911 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 NBPF11Q86T75 865 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
GABRB3-203ENST00000400188 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 CFHR5Q9BXR6 569 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
GABRB3-203ENST00000400188 DTNBO60941 627 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
GABRB3-203ENST00000400188 PSMA5P28066 241 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 ANAPC15P60006 121 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 IKQ13123 557 aaPredicted RBP11.28□□□□□ -0.6
GABRB3-203ENST00000400188 CCDC178Q5BJE1 867 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 SLF1Q9BQI6 1058 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 MAD2L2Q9UI95 211 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
GABRB3-203ENST00000400188 VWA5AO00534 786 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 LIFRP42702 1097 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 STAT2P52630 851 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 LBX2Q6XYB7 198 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 MICU3Q86XE3 530 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 DCAF4Q8WV16 495 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 IL17RAQ96F46 866 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 TM6SF1Q9BZW5 370 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 PRR12Q9ULL5 1215 aa11.27□□□□□ -0.6
GABRB3-203ENST00000400188 WDR19Q8NEZ3 1342 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 APOA5Q6Q788 366 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 NOL8Q76FK4 1167 aaKnown RBP11.27□□□□□ -0.61
GABRB3-203ENST00000400188 CATIPQ7Z7H3 387 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 REPS2Q8NFH8 660 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 SNX21Q969T3 373 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 PORCNQ9H237 461 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 PDRG1Q9NUG6 133 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
GABRB3-203ENST00000400188 ADAMTS5Q9UNA0 930 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 SLC12A7Q9Y666 1083 aa11.27□□□□□ -0.61
GABRB3-203ENST00000400188 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
GABRB3-203ENST00000400188 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-203ENST00000400188 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 PALM3A6NDB9 673 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-203ENST00000400188 PPFIA3O75145 1194 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
GABRB3-203ENST00000400188 NEK4P51957 841 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 ERVK-24P63145 666 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 SP3Q02447 781 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 PLS1Q14651 629 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 GRM4Q14833 912 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 CPXCR1Q8N123 301 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 PRPF38AQ8NAV1 312 aaKnown RBP11.26□□□□□ -0.61
GABRB3-203ENST00000400188 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 AGXT2Q9BYV1 514 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 ZNF214Q9UL59 606 aaPredicted RBP11.26□□□□□ -0.61
GABRB3-203ENST00000400188 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
GABRB3-203ENST00000400188 KLRF2D3W0D1 207 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 CYTH3O43739 400 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 CTCFP49711 727 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 AK2P54819 239 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 LACTBP83111 547 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-203ENST00000400188 FAM110CQ1W6H9 321 aa11.25□□□□□ -0.61
GABRB3-203ENST00000400188 SYDE2Q5VT97 1194 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms