RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 MMP19Q99542 508 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 ZKSCAN3Q9BRR0 538 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 DSCC1Q9BVC3 393 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 TEX13BQ9BXU2 312 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 MROH8Q9H579 483 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 HMX1Q9NP08 348 aaPredicted RBP9.93□□□□□ -0.82
USP16-202ENST00000399973 IL17RBQ9NRM6 502 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 SYNPO2Q9UMS6 1093 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 MCM3APO60318 1980 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 LRRC37A2A6NM11 1700 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 FRMPD2Q68DX3 1309 aaPredicted RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 B4E1Z4 1266 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 ZBED4O75132 1171 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 KDM4AO75164 1064 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 FARP2O94887 1054 aaPredicted RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 SLC25A27O95847 323 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 TFRCP02786 760 aaKnown RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 PCP11498 1178 aaKnown RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 FCER1AP12319 257 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 XRCC5P13010 732 aaKnown RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 CHMLP26374 656 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 STAT3P40763 770 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 KCTD2Q14681 263 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 MFSD14CQ5VZR4 134 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 RIOX2Q8IUF8 465 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 PRPF38AQ8NAV1 312 aaKnown RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 NPLOC4Q8TAT6 608 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 USP6NLQ92738 828 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 MKL1Q969V6 931 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 GMCL1Q96IK5 515 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 RAVER2Q9HCJ3 691 aaKnown RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 HOMER2Q9NSB8 354 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 FLRT1Q9NZU1 646 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 CTNNA3Q9UI47 895 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 FEM1BQ9UK73 627 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 ZNF214Q9UL59 606 aaPredicted RBP9.92□□□□□ -0.82
USP16-202ENST00000399973 BRCA2P51587 3418 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 LCTP09848 1927 aa9.92□□□□□ -0.82
USP16-202ENST00000399973 RPTORQ8N122 1335 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 SGPL1O95470 568 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 PGK2P07205 417 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 FGRP09769 529 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 ATXN8OSP0DMR3 200 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 TOP1P11387 765 aaKnown RBP9.91□□□□□ -0.82
USP16-202ENST00000399973 CNGA1P29973 690 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 CCND3P30281 292 aaPredicted RBP9.91□□□□□ -0.82
USP16-202ENST00000399973 CYP2C19P33261 490 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 COPB2P35606 906 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 CACNB2Q08289 660 aaPredicted RBP9.91□□□□□ -0.82
USP16-202ENST00000399973 CCDC174Q6PII3 467 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 FAM160B2Q86V87 743 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 REPS2Q8NFH8 660 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 TMEM47Q9BQJ4 181 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 GPCPD1Q9NPB8 672 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 PAK6Q9NQU5 681 aaPredicted RBP9.91□□□□□ -0.82
USP16-202ENST00000399973 SLC5A4Q9NY91 659 aa9.91□□□□□ -0.82
USP16-202ENST00000399973 STRNO43815 780 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 COBLO75128 1261 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 SLC16A2P36021 539 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 SNAP25P60880 206 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 PTH1RQ03431 593 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 MAP3K21Q5TCX8 1036 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 IQCA1Q86XH1 822 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 CHURC1Q8WUH1 139 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 DCAF4Q8WV16 495 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 SLC38A10Q9HBR0 1119 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 ADAMTS5Q9UNA0 930 aa9.9□□□□□ -0.82
USP16-202ENST00000399973 TNKSO95271 1327 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 SMCHD1A6NHR9 2005 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 SGSM2O43147 1006 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 HOXC6P09630 235 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 TAL1P17542 331 aaPredicted RBP9.89□□□□□ -0.83
USP16-202ENST00000399973 RCSD1Q6JBY9 416 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 RALYLQ86SE5 291 aaKnown RBP9.89□□□□□ -0.83
USP16-202ENST00000399973 ABRAQ8N0Z2 381 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 DIS3LQ8TF46 1054 aaKnown RBP9.89□□□□□ -0.83
USP16-202ENST00000399973 DDX11Q96FC9 970 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 MAML3Q96JK9 1138 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 UBAC1Q9BSL1 405 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 KRT23Q9C075 422 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 KAT14Q9H8E8 782 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 CNNM2Q9H8M5 875 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 RNF146Q9NTX7 359 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 TCP11L1Q9NUJ3 509 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 PRR12Q9ULL5 1215 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 RIPK3Q9Y572 518 aa9.89□□□□□ -0.83
USP16-202ENST00000399973 DHX16O60231 1041 aaKnown RBP9.88□□□□□ -0.83
USP16-202ENST00000399973 GOLGA8HP0CJ92 632 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 PDHBP11177 359 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 ALAS1P13196 640 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 OAZ1P54368 228 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 TRDNQ13061 729 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 SYDE2Q5VT97 1194 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
USP16-202ENST00000399973 ANO1Q5XXA6 986 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 OLFML2BQ68BL8 750 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 TTBK2Q6IQ55 1244 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 ANKRD35Q8N283 1001 aa9.88□□□□□ -0.83
USP16-202ENST00000399973 PNMA1Q8ND90 353 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms