RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CYP27A1Q02318 531 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 TBC1D10CQ8IV04 446 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 VIPAS39Q9H9C1 493 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 DUSP10Q9Y6W6 482 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 RANBP6O60518 1105 aaKnown RBP19.12■□□□□ 0.65
PTPRA-205ENST00000399903 CTDSPL2Q05D32 466 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 N4BP2L2Q92802 583 aaPredicted RBP19.12■□□□□ 0.65
PTPRA-205ENST00000399903 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
PTPRA-205ENST00000399903 PAPPAQ13219 1627 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 IFIT3O14879 490 aaKnown RBP19.12■□□□□ 0.65
PTPRA-205ENST00000399903 AMPD2Q01433 879 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 SLC24A3Q9HC58 644 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 DONSONQ9NYP3 566 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 SLC12A7Q9Y666 1083 aa19.12■□□□□ 0.65
PTPRA-205ENST00000399903 ADD2P35612 726 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 TOB1P50616 345 aaPredicted RBP19.11■□□□□ 0.65
PTPRA-205ENST00000399903 SCLT1Q96NL6 688 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 SLIT2O94813 1529 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 MYH15Q9Y2K3 1946 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 FAM205CA6NFA0 338 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 PDE2AO00408 941 aaPredicted RBP19.11■□□□□ 0.65
PTPRA-205ENST00000399903 NF2P35240 595 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 PUM3Q15397 648 aaKnown RBP19.11■□□□□ 0.65
PTPRA-205ENST00000399903 ERFEQ4G0M1 354 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 CCNI2Q6ZMN8 369 aaPredicted RBP19.11■□□□□ 0.65
PTPRA-205ENST00000399903 OXER1Q8TDS5 423 aa19.11■□□□□ 0.65
PTPRA-205ENST00000399903 SMCR8Q8TEV9 937 aaPredicted RBP19.11■□□□□ 0.65
PTPRA-205ENST00000399903 FBXO2Q9UK22 296 aaPredicted RBP19.11■□□□□ 0.65
PTPRA-205ENST00000399903 CCDC196A0A1B0GTZ2 297 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 ZPR1O75312 459 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 ERCC5P28715 1186 aaPredicted RBP19.1■□□□□ 0.65
PTPRA-205ENST00000399903 GYG1P46976 350 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 GSCP56915 257 aaPredicted RBP19.1■□□□□ 0.65
PTPRA-205ENST00000399903 GUCY1A3Q02108 690 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■■□□□ 11.8
PTPRA-205ENST00000399903 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.1■□□□□ 0.65
PTPRA-205ENST00000399903 ERVV-1B6SEH8 477 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 MBD4O95243 580 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 IFT88Q13099 833 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 TRAPPC11Q7Z392 1133 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 RPAINQ86UA6 219 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 LINC00116Q8NCU8 138 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 EHD2Q9NZN4 543 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 VPS54Q9P1Q0 977 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 KRT14P02533 472 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 PDE6BP35913 854 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 CDR1P51861 262 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 E2F5Q15329 346 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 APTXQ7Z2E3 356 aaKnown RBP19.1■□□□□ 0.65
PTPRA-205ENST00000399903 SPATA5Q8NB90 893 aa19.1■□□□□ 0.65
PTPRA-205ENST00000399903 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.1■□□□□ 0.65
PTPRA-205ENST00000399903 DMGDHQ9UI17 866 aaKnown RBP19.1■□□□□ 0.65
PTPRA-205ENST00000399903 PTPREP23469 700 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 APBA1Q02410 837 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 SLC4A8Q2Y0W8 1093 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 ACTN4O43707 911 aaKnown RBP19.09■□□□□ 0.65
PTPRA-205ENST00000399903 HSF2BPO75031 334 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 HPDP32754 393 aaPredicted RBP19.09■□□□□ 0.65
PTPRA-205ENST00000399903 COPB1P53618 953 aaKnown RBP19.09■□□□□ 0.65
PTPRA-205ENST00000399903 SEC24CP53992 1094 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 CKAP4Q07065 602 aaKnown RBP19.09■□□□□ 0.65
PTPRA-205ENST00000399903 DPYDQ12882 1025 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 MSL3Q8N5Y2 521 aaKnown RBP19.09■□□□□ 0.65
PTPRA-205ENST00000399903 IFT81Q8WYA0 676 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 LPIN2Q92539 896 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 LRRC1Q9BTT6 524 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 LUC7L2Q9Y383 392 aaKnown RBP19.09■□□□□ 0.65
PTPRA-205ENST00000399903 SPATA31A5Q5VU36 1347 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 SPATA31A7Q8IWB4 1347 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 RFX7Q2KHR2 1363 aa19.09■□□□□ 0.65
PTPRA-205ENST00000399903 A0A087X0B3 334 aa19.08■□□□□ 0.65
PTPRA-205ENST00000399903 CCDC181Q5TID7 509 aa19.08■□□□□ 0.65
PTPRA-205ENST00000399903 REXO2Q9Y3B8 237 aaKnown RBP19.08■□□□□ 0.65
PTPRA-205ENST00000399903 TTC26A0AVF1 554 aa19.08■□□□□ 0.65
PTPRA-205ENST00000399903 UBAP1LF5GYI3 381 aa19.08■□□□□ 0.65
PTPRA-205ENST00000399903 NEBLO76041 1014 aa19.08■□□□□ 0.65
PTPRA-205ENST00000399903 IGHMBP2P38935 993 aaKnown RBP19.08■□□□□ 0.65
PTPRA-205ENST00000399903 SARSP49591 514 aaKnown RBP19.08■□□□□ 0.65
PTPRA-205ENST00000399903 NAP1L1P55209 391 aaKnown RBP19.08■□□□□ 0.65
PTPRA-205ENST00000399903 CHRNDQ07001 517 aa19.08■□□□□ 0.65
PTPRA-205ENST00000399903 TRIM22Q8IYM9 498 aa19.08■□□□□ 0.65
PTPRA-205ENST00000399903 ZFYP08048 801 aaPredicted RBP19.08■□□□□ 0.64
PTPRA-205ENST00000399903 SLC5A1P13866 664 aa19.08■□□□□ 0.64
PTPRA-205ENST00000399903 KANK3Q6NY19 840 aa19.08■□□□□ 0.64
PTPRA-205ENST00000399903 RASSF8Q8NHQ8 419 aa19.08■□□□□ 0.64
PTPRA-205ENST00000399903 MYH8P13535 1937 aa19.08■□□□□ 0.64
PTPRA-205ENST00000399903 KCTD19Q17RG1 926 aaPredicted RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 AMIGO3Q86WK7 504 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 NOC3LQ8WTT2 800 aaKnown RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 LACRTQ9GZZ8 138 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 KCNJ18B7U540 433 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 KCNJ12Q14500 433 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 TTF1Q15361 905 aaPredicted RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 ZNF174Q15697 407 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 TRIML1Q8N9V2 468 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 SYMPKQ92797 1274 aaKnown RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 PAGE5Q96GU1 130 aa19.07■□□□□ 0.64
PTPRA-205ENST00000399903 PPANQ9NQ55 473 aaKnown RBP19.07■□□□□ 0.64
PTPRA-205ENST00000399903 LRP2BPQ9P2M1 347 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms