RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PTGS1P23219 599 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PRPSAP1Q14558 356 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 FGD2Q7Z6J4 655 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 CDH24Q86UP0 819 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 TRIM69Q86WT6 500 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 MRPS27Q92552 414 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 TTC17Q96AE7 1141 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 IRX1P78414 480 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 DCUN1D2Q6PH85 259 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ANO5Q75V66 913 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 MDM1Q8TC05 714 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PARD3BQ8TEW8 1205 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 RSPH1Q8WYR4 309 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ZBTB18Q99592 522 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 IFT122Q9HBG6 1241 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PARVAQ9NVD7 372 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 NSMCE4AQ9NXX6 385 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 AFAP1Q8N556 730 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 GTF3C6Q969F1 213 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ERAP1Q9NZ08 941 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PKD2Q13563 968 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 CNPY4Q8N129 248 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 FNBP1Q96RU3 617 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ANKRD2Q9GZV1 360 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 GID8Q9NWU2 228 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 ASIC1P78348 528 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PSMD2Q13200 908 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 PLEKHO1Q53GL0 409 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 CATSPER3Q86XQ3 398 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 KLC2Q9H0B6 622 aa9.37□□□□□ -0.91
CACNA1C-220ENST00000399655 RAD54L2Q9Y4B4 1467 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 HSPA9P38646 679 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 KLHL12Q53G59 568 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 IQANK1A0A1B0GTG1 560 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 MAP3K13O43283 966 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 ALDH1L1O75891 902 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 BCRP11274 1271 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 KRT78Q8N1N4 520 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 SPG7Q9UQ90 795 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 SETD1BQ9UPS6 1966 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 FAM177BA6PVY3 158 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 PDE9AO76083 593 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 HSPA6P17066 643 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 ZNF428Q96B54 188 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 KAT14Q9H8E8 782 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 ATP5HO75947 161 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 TSPAN9O75954 239 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 GLRX3O76003 335 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 TAGAPQ8N103 731 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 PROCA1Q8NCQ7 364 aaPredicted RBP9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 NFRKBQ6P4R8 1299 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 SRLQ86TD4 932 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC197Q8NCU1 140 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 ZBED2Q9BTP6 218 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 SPDYE3A6NKU9 549 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 SIN3AQ96ST3 1273 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 HPS5Q9UPZ3 1129 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 GOLGA8MH3BSY2 632 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 PUM3Q15397 648 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 BCAP31P51572 246 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 PSMC6P62333 389 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 KRT72Q14CN4 511 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 TBC1D12O60347 775 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 AP1B1Q10567 949 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 BBS5Q8N3I7 341 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
CACNA1C-220ENST00000399655 PIK3CDO00329 1044 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 ZNF213O14771 459 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 E2F6O75461 281 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC105Q8IYK2 499 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 CNOT10Q9H9A5 744 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 SPAG7O75391 227 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 CCDC149Q6ZUS6 474 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 PPHLN1Q8NEY8 458 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 DEPDC7Q96QD5 511 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 TRIM33Q9UPN9 1127 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 ISM2Q6H9L7 571 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 GGT6Q6P531 493 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 ATP8B4Q8TF62 1192 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 GPBP1L1Q9HC44 474 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 CDH2P19022 906 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 FCHSD1Q86WN1 690 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 PLD3Q8IV08 490 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 TEKT4Q8WW24 435 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 ANKRD30BQ9BXX2 1392 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 AKR1B15C9JRZ8 316 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 AP1S1P61966 158 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 BTN2A2Q8WVV5 523 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 STAMBPL1Q96FJ0 436 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 ZNF711Q9Y462 761 aa9.35□□□□□ -0.91
CACNA1C-220ENST00000399655 IDH1O75874 414 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms