RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 SEMA3EO15041 775 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 RNASE9P60153 205 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 BLMP54132 1417 aaPredicted RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 GDF11O95390 407 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 ARMCX5Q6P1M9 558 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 MIGA2Q7L4E1 593 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 EEPD1Q7L9B9 569 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 PRDM5Q9NQX1 630 aaPredicted RBP13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 NDUFB9Q9Y6M9 179 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
CACNA1C-213ENST00000399629 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 FASTKD5Q7L8L6 764 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 LBHD1Q9BQE6 289 aaPredicted RBP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 AFF2P51816 1311 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 C21orf2O43822 256 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 N4BP1O75113 896 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 TECP42680 631 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 MAIP1Q8WWC4 291 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 RAB3IPQ96QF0 476 aaPredicted RBP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 PCDHA12Q9UN75 941 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 MYL5Q02045 173 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 SYCE1Q8N0S2 351 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 LLPHQ9BRT6 129 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 SAMD15Q9P1V8 674 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 UBN1Q9NPG3 1134 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 ADAMTS12P58397 1594 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 CYP26C1Q6V0L0 522 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 POMGNT1Q8WZA1 660 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 PANK4Q9NVE7 773 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 A6NJR5 290 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 INTS8Q75QN2 995 aaKnown RBP13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 NELFBQ8WX92 580 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 ATP6V0A1Q93050 837 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 ZNF577Q9BSK1 485 aa13.29□□□□□ -0.28
CACNA1C-213ENST00000399629 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 FAM170AA1A519 330 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 INO80B-WBP1J3KQ70 363 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 SFMBT2Q5VUG0 894 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 INO80BQ9C086 356 aaPredicted RBP13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 TTC36A6NLP5 189 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 UBXN2AP68543 259 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 TBC1D32Q96NH3 1257 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 GTF2F1P35269 517 aaKnown RBP eCLIP13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 PDE6CP51160 858 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 RPS6KA2Q15349 733 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 IGSF22Q8N9C0 903 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 CACTINQ8WUQ7 758 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 GNAT1P11488 350 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 MFSD14CQ5VZR4 134 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 CCDC186Q7Z3E2 898 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 ARFGAP3Q9NP61 516 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 KCNH4Q9UQ05 1017 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 KLRF2D3W0D1 207 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 PCCAP05165 728 aaPredicted RBP13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 KCNQ4P56696 695 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 KLHL30Q0D2K2 578 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 FAM178BQ8IXR5 827 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 ATP2A3Q93084 1043 aa13.28□□□□□ -0.28
CACNA1C-213ENST00000399629 KIAA0232Q92628 1395 aa13.27□□□□□ -0.28
CACNA1C-213ENST00000399629 MCM6Q14566 821 aa13.27□□□□□ -0.28
CACNA1C-213ENST00000399629 ZNF654Q8IZM8 581 aa13.27□□□□□ -0.28
CACNA1C-213ENST00000399629 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.28
CACNA1C-213ENST00000399629 SCYL1Q96KG9 808 aa13.27□□□□□ -0.28
CACNA1C-213ENST00000399629 BLIDQ8IZY5 108 aa13.27□□□□□ -0.28
CACNA1C-213ENST00000399629 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 CPA1P15085 419 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 RINT1Q6NUQ1 792 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 MOSPD1Q9UJG1 213 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 I3L4J1 428 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 MMP10P09238 476 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 KCTD1Q719H9 257 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 SDCCAG8Q86SQ7 713 aaPredicted RBP13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 RAET1EQ8TD07 263 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 SLC7A3Q8WY07 619 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 BLZF1Q9H2G9 400 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 ZNF233A6NK53 670 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 TTLL1O95922 423 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 RHOXF2BP0C7M4 288 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 CCDC121Q6ZUS5 278 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 RHOXF2Q9BQY4 288 aa13.27□□□□□ -0.29
CACNA1C-213ENST00000399629 TBC1D8O95759 1140 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 STAT2P52630 851 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
CACNA1C-213ENST00000399629 ZNF18P17022 549 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms