RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 ATF2P15336 505 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 STAT1P42224 750 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 GUCY2DQ02846 1103 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 PTPROQ16827 1216 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 AP1ARQ63HQ0 302 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 GAS2L3Q86XJ1 694 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 PARP10Q53GL7 1025 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 DPH5Q9H2P9 285 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 TYW1Q9NV66 732 aaKnown RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 STMN1P16949 149 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 KCTD16Q68DU8 428 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 CCDC125Q86Z20 511 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 ZNF654Q8IZM8 581 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 CCDC197Q8NCU1 140 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 MYOM2P54296 1465 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 CYP2J2P51589 502 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 BSPRYQ5W0U4 402 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 PALM2Q8IXS6 379 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 MAST3O60307 1309 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 CASP14P31944 242 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 PEX19P40855 299 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 SATB1Q01826 763 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 EPHB4P54760 987 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 UIMC1Q96RL1 719 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 CARMIL3Q8ND23 1372 aa12.36□□□□□ -0.43
LAMA3-203ENST00000399516 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
LAMA3-203ENST00000399516 ADGRL2O95490 1459 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.43
LAMA3-203ENST00000399516 TAF5LO75529 589 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 EVI5O60447 810 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 PDE8AO60658 829 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 IFNB1P01574 187 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 SPATA1Q5VX52 437 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 SYMPKQ92797 1274 aaKnown RBP12.35□□□□□ -0.43
LAMA3-203ENST00000399516 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 ZAP70P43403 619 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 SLC12A2P55011 1212 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 KIF1BO60333 1816 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 PDE6CP51160 858 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 IFT88Q13099 833 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 KRT81Q14533 505 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 NRBP1Q9UHY1 535 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 H7C1D1 291 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 GNPATO15228 680 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 CD19P15391 556 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 MAN1A1P33908 653 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 BLIDQ8IZY5 108 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 RUNDC3BQ96NL0 473 aa12.35□□□□□ -0.43
LAMA3-203ENST00000399516 SUN1O94901 812 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 MYCLP12524 364 aaPredicted RBP12.34□□□□□ -0.43
LAMA3-203ENST00000399516 EFCC1Q9HA90 598 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 MAGEF1Q9HAY2 307 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 PTPRTO14522 1441 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 BAG2O95816 211 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 ATF7P17544 494 aaPredicted RBP12.34□□□□□ -0.43
LAMA3-203ENST00000399516 TMCO4Q5TGY1 634 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 SERPINB6P35237 376 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 KRT19P08727 400 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 BANK1Q8NDB2 785 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 CLIC4Q9Y696 253 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 C11orf57Q6ZUT1 292 aaPredicted RBP12.34□□□□□ -0.43
LAMA3-203ENST00000399516 TPH2Q8IWU9 490 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 LARSQ9P2J5 1176 aaKnown RBP12.34□□□□□ -0.43
LAMA3-203ENST00000399516 ARMCX3Q9UH62 379 aaPredicted RBP12.34□□□□□ -0.43
LAMA3-203ENST00000399516 EHHADHQ08426 723 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 BBOF1Q8ND07 529 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 PPP1R9AQ9ULJ8 1098 aa12.34□□□□□ -0.43
LAMA3-203ENST00000399516 SMCO2A6NFE2 343 aa12.33□□□□□ -0.43
LAMA3-203ENST00000399516 P4HA1P13674 534 aa12.33□□□□□ -0.43
LAMA3-203ENST00000399516 SPATS2LQ9NUQ6 558 aaKnown RBP12.33□□□□□ -0.43
LAMA3-203ENST00000399516 TNNI1P19237 187 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 CNGA1P29973 690 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 DBN1Q16643 649 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 NXNQ6DKJ4 435 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 EPN1Q9Y6I3 576 aaPredicted RBP12.33□□□□□ -0.44
LAMA3-203ENST00000399516 NOP56O00567 594 aaKnown RBP12.33□□□□□ -0.44
LAMA3-203ENST00000399516 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
LAMA3-203ENST00000399516 LRRC8CQ8TDW0 803 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 CARD10Q9BWT7 1032 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 PANK4Q9NVE7 773 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 HAUS2Q9NVX0 235 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 LRRD1A4D1F6 860 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 NEURL1BA8MQ27 555 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 RTEL1Q9NZ71 1219 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 CABLES1Q8TDN4 633 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms