RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 RASGRF1Q13972 1273 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ELF2Q15723 593 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 PKN2Q16513 984 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 EML3Q32P44 896 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 MILR1Q7Z6M3 343 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 RPAP2Q8IXW5 612 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 MIGA1Q8NAN2 632 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 GIMAP8Q8ND71 665 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ALG13Q9NP73 1137 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 COMMD8Q9NX08 183 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 SNX5Q9Y5X3 404 aa7.14□□□□□ -1.27
TRAPPC13-202ENST00000399438 ERBB4Q15303 1308 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 ERICH4A6NGS2 130 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 IRS4O14654 1257 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 PDE8AO60658 829 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 TNFRSF21O75509 655 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 CAP2P40123 477 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 TCIRG1Q13488 830 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 MTMR2Q13614 643 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 RTL10Q7L3V2 364 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 RSRC2Q7L4I2 434 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 GALNT5Q7Z7M9 940 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZNF454Q8N9F8 522 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 THAP3Q8WTV1 239 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 MRGBPQ9NV56 204 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 K7ENM7 598 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 ABLIM3O94929 683 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 SOX9P48436 509 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 IFRD2Q12894 506 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 FAM180BQ6P0A1 224 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 XRRA1Q6P2D8 792 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 ILDR1Q86SU0 546 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 TAF4BQ92750 862 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 TSPY26PQ9H489 355 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 AASDHPPTQ9NRN7 309 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZFATQ9P243 1243 aa7.13□□□□□ -1.27
TRAPPC13-202ENST00000399438 E2F8A0AVK6 867 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 DDX11L8A8MPP1 907 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 BAG4O95429 457 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 GCP02774 474 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 CCT4P50991 539 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 ATP1A2P50993 1020 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 RAB3GAP1Q15042 981 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 WDR66Q8TBY9 1149 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 USP33Q8TEY7 942 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 ANKRD24Q8TF21 1146 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 NINJ1Q92982 152 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 COL26A1Q96A83 441 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 MAP3K2Q9Y2U5 619 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 FAM170AA1A519 330 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 ERC2O15083 957 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 NAP1L1P55209 391 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 PIP4K2BP78356 416 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 KLHL10Q6JEL2 608 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 UNC5DQ6UXZ4 953 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 NIM1KQ8IY84 436 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 YIPF4Q9BSR8 244 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 SRCIN1Q9C0H9 1055 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 BLOC1S4Q9NUP1 217 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 MAP3K5Q99683 1374 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 PTPRCP08575 1304 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 LTN1O94822 1766 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 TMEM110-MUSTN1A8MSY1 372 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 DDR2Q16832 855 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZC3H12BQ5HYM0 836 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 SWSAP1Q6NVH7 229 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 LHFPL2Q6ZUX7 228 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 STRA8Q7Z7C7 330 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 KIFC2Q96AC6 838 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 CDK5RAP3Q96JB5 506 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 GRPEL1Q9HAV7 217 aa7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 TLR7Q9NYK1 1049 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 PNMA8BQ9ULN7 279 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-202ENST00000399438 MAP3K13O43283 966 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 PLA2G4AP47712 749 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 EIF1AXP47813 144 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 PARP10Q53GL7 1025 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 COBLL1Q53SF7 1204 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 CPLX2Q6PUV4 134 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 TRIM50Q86XT4 487 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 GBP4Q96PP9 640 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 TRIM8Q9BZR9 551 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 RASSF1Q9NS23 344 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 SUN2Q9UH99 717 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 PHTF1Q9UMS5 762 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 HTATSF1O43719 755 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 SETSIPP0DME0 302 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 EIF4A1P60842 406 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 KRT83P78385 493 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 C1orf141Q5JVX7 400 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 AGAP9Q5VTM2 703 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 C1orf228Q6PIY5 440 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 SYNPOQ8N3V7 929 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 ARL10Q8N8L6 244 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 CHMP4CQ96CF2 233 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 TMX3Q96JJ7 454 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 ESYT1Q9BSJ8 1104 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 ST7Q9NRC1 585 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 ZDHHC9Q9Y397 364 aa7.11□□□□□ -1.27
TRAPPC13-202ENST00000399438 SRCAPQ6ZRS2 3230 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms