RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 SMCHD1A6NHR9 2005 aa12.23□□□□□ -0.45
CYCSP55-201ENST00000399027 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 ATP2A1O14983 1001 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 GNRH1P01148 92 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 CASTP20810 708 aaKnown RBP12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 RPS6KB1P23443 525 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 KIF22Q14807 665 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 CCDC96Q2M329 555 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 Q3C1V9 767 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 RUFY3Q7L099 469 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 PAGR1Q9BTK6 254 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 GPHNQ9NQX3 736 aaPredicted RBP12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 ZNF214Q9UL59 606 aaPredicted RBP12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
CYCSP55-201ENST00000399027 PALM3A6NDB9 673 aaPredicted RBP12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 PEX10O60683 326 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 DDAH1O94760 285 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 OAZ1P54368 228 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 GRM4Q14833 912 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 TMEM132BQ14DG7 1078 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 ARHGEF6Q15052 776 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 CATIPQ7Z7H3 387 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 LRRC2Q9BYS8 371 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 ARHGAP39Q9C0H5 1083 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 SPATC1LQ9H0A9 340 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 RANBP17Q9H2T7 1088 aaKnown RBP12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 PRR12Q9ULL5 1215 aa12.21□□□□□ -0.45
CYCSP55-201ENST00000399027 ZNF536O15090 1300 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 LCTP09848 1927 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 GOLGA8HP0CJ92 632 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 CPA1P15085 419 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 MAPK4P31152 587 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 PSMC4P43686 418 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 FCGRTP55899 365 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 CCNA1P78396 465 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 SYDE2Q5VT97 1194 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 Q6ZUG5 572 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 OTOP1Q7RTM1 612 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 CTU1Q7Z7A3 348 aaKnown RBP12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 RIOX2Q8IUF8 465 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 SHCBP1Q8NEM2 672 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 TRIM47Q96LD4 638 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 TCEANC2Q96MN5 208 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 MOV10L1Q9BXT6 1211 aaKnown RBP12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 PORCNQ9H237 461 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
CYCSP55-201ENST00000399027 NID2Q14112 1375 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 ZBED4O75132 1171 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 SLC25A27O95847 323 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 CALM1P0DP23 149 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 CALM2P0DP24 149 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 CALM3P0DP25 149 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 SLC16A2P36021 539 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 STAT3P40763 770 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 RCAN1P53805 252 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 PRMT2P55345 433 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 EVCP57679 992 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 STAG2Q8N3U4 1231 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 TEX13BQ9BXU2 312 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 EFCC1Q9HA90 598 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 SLC12A7Q9Y666 1083 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
CYCSP55-201ENST00000399027 KLRF2D3W0D1 207 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 TNPO2O14787 897 aaKnown RBP12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 FMNL1O95466 1100 aaPredicted RBP12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 COPB2P35606 906 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 NFXL1Q6ZNB6 911 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 GPR142Q7Z601 462 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 MYL10Q9BUA6 226 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 BACH2Q9BYV9 841 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 MROH8Q9H579 483 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 TRIM17Q9Y577 477 aa12.18□□□□□ -0.46
CYCSP55-201ENST00000399027 STRNO43815 780 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 ICAM1P05362 532 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 ERCC3P19447 782 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 HOXD10P28358 340 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 SMARCA1P28370 1054 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 KIF5BP33176 963 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 PLS1Q14651 629 aa12.17□□□□□ -0.46
CYCSP55-201ENST00000399027 COL13A1Q5TAT6 717 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms