RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CCDC50Q8IVM0 306 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 CCDC26Q8TAB7 109 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 TTC14Q96N46 770 aa15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 STMN4Q9H169 189 aaPredicted RBP15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 GPHNQ9NQX3 736 aaPredicted RBP15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 DDX25Q9UHL0 483 aaKnown RBP15.8■□□□□ 0.12
PCDHGA11-201ENST00000398587 ERCC3P19447 782 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 GRIPAP1Q4V328 841 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 SFMBT2Q5VUG0 894 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 MAEAQ7L5Y9 396 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 AMNQ9BXJ7 453 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 KCNG1Q9UIX4 513 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 TTLL1O95922 423 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 CFAP58Q5T655 872 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 AK8Q96MA6 479 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 HARSP12081 509 aaKnown RBP15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 SEL1L2Q5TEA6 688 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 RRAGAQ7L523 313 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 GSTA5Q7RTV2 222 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 KRT27Q7Z3Y8 459 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 IWS1Q96ST2 819 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 ZC3H13Q5T200 1668 aaKnown RBP15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 POLR2MP0CAP2 368 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 KRT5P13647 590 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 DPCR1Q3MIW9 517 aa15.79■□□□□ 0.12
PCDHGA11-201ENST00000398587 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 SPOPO43791 374 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 IVLP07476 585 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 USP17L8P0C7I0 530 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 SLFN14P0C7P3 912 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 NLRX1Q86UT6 975 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 IQGAP1P46940 1657 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 WDR19Q8NEZ3 1342 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 CYP2D7A0A087X1C5 515 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 TCP10L2B9ZVM9 353 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 TMEM232C9JQI7 657 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 hCG_1984214I3L0E3 225 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 ETF1P62495 437 aaKnown RBP15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 FOXO4P98177 505 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 CALCOCO2Q13137 446 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 DIXDC1Q155Q3 683 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 FAM26FQ5R3K3 315 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 C8orf74Q6P047 294 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 ZNF713Q8N859 430 aaPredicted RBP15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 STAG1Q8WVM7 1258 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 NLRC4Q9NPP4 1024 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 ELF2Q15723 593 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 DCAF15Q66K64 600 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 DGKHQ86XP1 1220 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 PCDHB13Q9Y5F0 798 aa15.78■□□□□ 0.12
PCDHGA11-201ENST00000398587 CAPN2P17655 700 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 MIER3Q7Z3K6 550 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 APBB1IPQ7Z5R6 666 aaPredicted RBP15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 AIFM3Q96NN9 605 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 MTA3Q9BTC8 594 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 A0A1W2PRG0 241 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 CDC25BP30305 580 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 SLFNL1Q499Z3 407 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 IFIH1Q9BYX4 1025 aaKnown RBP15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 IQSEC2Q5JU85 1478 aa15.77■□□□□ 0.12
PCDHGA11-201ENST00000398587 ADGRB1O14514 1584 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 NOP56O00567 594 aaKnown RBP15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 BCRP11274 1271 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 XRCC5P13010 732 aaKnown RBP15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 U2AF2P26368 475 aaKnown RBP eCLIP15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 LONRF3Q496Y0 759 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 SEPT12Q8IYM1 358 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 AS3MTQ9HBK9 375 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 ARMCX3Q9UH62 379 aaPredicted RBP15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 TSKSQ9UJT2 592 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 USP42Q9H9J4 1324 aaKnown RBP15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 TECPR2O15040 1411 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 SNAP23O00161 211 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 STX10O60499 249 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 CC2D2BQ6DHV5 1058 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 MINPP1Q9UNW1 487 aa15.77■□□□□ 0.11
PCDHGA11-201ENST00000398587 COL15A1P39059 1388 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 RASGRP4Q8TDF6 673 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 ATRIPQ8WXE1 791 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 DHX36Q9H2U1 1008 aaKnown RBP15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 VPS18Q9P253 973 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 GCFC2P16383 781 aaKnown RBP15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 ALX1Q15699 326 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 C11orf57Q6ZUT1 292 aaPredicted RBP15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 DPH6Q7L8W6 267 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 SRPRBQ9Y5M8 271 aaKnown RBP15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 COL4A3BPQ9Y5P4 624 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 ALAS1P13196 640 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 TSGA10IPQ3SY00 556 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 TYW1BQ6NUM6 668 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 PANK4Q9NVE7 773 aa15.76■□□□□ 0.11
PCDHGA11-201ENST00000398587 PSDA5PKW4 1024 aaPredicted RBP15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 PPP1R7Q15435 360 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 AZI2Q9H6S1 392 aa15.75■□□□□ 0.11
PCDHGA11-201ENST00000398587 KRT26Q7Z3Y9 468 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms