RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
MSL3-207ENST00000398527 A0A087WZG4 1122 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 RPL17P18621 184 aaKnown RBP12.12□□□□□ -0.47
MSL3-207ENST00000398527 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
MSL3-207ENST00000398527 TOB2Q14106 344 aaPredicted RBP12.12□□□□□ -0.47
MSL3-207ENST00000398527 PARP10Q53GL7 1025 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 ALKBH2Q6NS38 261 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 UBE3BQ7Z3V4 1068 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 SVIPQ8NHG7 77 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 ERP27Q96DN0 273 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 EIF3FO00303 357 aaPredicted RBP12.12□□□□□ -0.47
MSL3-207ENST00000398527 RBP3P10745 1247 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 PDE4BQ07343 736 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
MSL3-207ENST00000398527 KBTBD3Q8NAB2 608 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 HDAC7Q8WUI4 952 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 DSCC1Q9BVC3 393 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 SENP2Q9HC62 589 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 ANKIB1Q9P2G1 1089 aa12.12□□□□□ -0.47
MSL3-207ENST00000398527 DDX41Q9UJV9 622 aaKnown RBP12.12□□□□□ -0.47
MSL3-207ENST00000398527 ZNF609O15014 1411 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 ATP5J2-PTCD1G3V325 749 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 MAN1A1P33908 653 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 IL15P40933 162 aaPredicted RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 MMS22LQ6ZRQ5 1243 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 GTF3C6Q969F1 213 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 AGXT2Q9BYV1 514 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 H0YIN7 160 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 CAVIN2O95810 425 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 CPA1P15085 419 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 PECAM1P16284 738 aaPredicted RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 PIK3CAP42336 1068 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 FOXO4P98177 505 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 DNM1Q05193 864 aaKnown RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 C10orf62Q5T681 223 aaPredicted RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 SPATA21Q7Z572 469 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 FRS2Q8WU20 508 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 CAPS2Q9BXY5 557 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 SIL1Q9H173 461 aa12.11□□□□□ -0.47
MSL3-207ENST00000398527 ZSCAN16Q9H4T2 348 aaPredicted RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 DDX19AQ9NUU7 478 aaKnown RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 ABT1Q9ULW3 272 aaKnown RBP12.11□□□□□ -0.47
MSL3-207ENST00000398527 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.1□□□□□ -0.47
MSL3-207ENST00000398527 A1BGP04217 495 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 TFCP2Q12800 502 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 IQCB1Q15051 598 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 ZNF589Q86UQ0 364 aaPredicted RBP12.1□□□□□ -0.47
MSL3-207ENST00000398527 ARMC2Q8NEN0 867 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 RSRC1Q96IZ7 334 aaKnown RBP12.1□□□□□ -0.47
MSL3-207ENST00000398527 NEK1Q96PY6 1258 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 NAP1L4Q99733 375 aaKnown RBP12.1□□□□□ -0.47
MSL3-207ENST00000398527 DCAF16Q9NXF7 216 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 LAMA4Q16363 1823 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 FIBPO43427 364 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 CCDC192P0DO97 292 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 EAPPQ56P03 285 aaPredicted RBP12.1□□□□□ -0.47
MSL3-207ENST00000398527 MTHFD1LQ6UB35 978 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 CCBE1Q6UXH8 406 aaPredicted RBP12.1□□□□□ -0.47
MSL3-207ENST00000398527 NEK10Q6ZWH5 1172 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 KIAA0825Q8IV33 1275 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 KRT222Q8N1A0 295 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
MSL3-207ENST00000398527 CAPNS2Q96L46 248 aa12.1□□□□□ -0.47
MSL3-207ENST00000398527 ZPR1O75312 459 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 EIF4BP23588 611 aaKnown RBP12.09□□□□□ -0.47
MSL3-207ENST00000398527 ECE1P42892 770 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 TRIM28Q13263 835 aaKnown RBP12.09□□□□□ -0.47
MSL3-207ENST00000398527 NFIXQ14938 502 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
MSL3-207ENST00000398527 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 TSC1Q92574 1164 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 GSDMAQ96QA5 445 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 PHACTR1Q9C0D0 580 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 MTRF1O75570 445 aaKnown RBP12.09□□□□□ -0.47
MSL3-207ENST00000398527 FGFR1OPO95684 399 aaKnown RBP12.09□□□□□ -0.47
MSL3-207ENST00000398527 MAGEA9P43362 315 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 MAGEA10P43363 369 aaPredicted RBP12.09□□□□□ -0.47
MSL3-207ENST00000398527 MPP3Q13368 585 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
MSL3-207ENST00000398527 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 TCEAL9Q9UHQ7 104 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms