RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 DHX32Q7L7V1 743 aaKnown RBP18.48■□□□□ 0.55
MBD1-207ENST00000398488 RAB11FIP4Q86YS3 637 aa18.48■□□□□ 0.55
MBD1-207ENST00000398488 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
MBD1-207ENST00000398488 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
MBD1-207ENST00000398488 PLXNB2O15031 1838 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 PLA2G6O60733 806 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 FCGRTP55899 365 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 PRKCZQ05513 592 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 TROAPQ12815 778 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 KRT32Q14532 448 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 PLS1Q14651 629 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 KIF22Q14807 665 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 RAVER2Q9HCJ3 691 aaKnown RBP18.47■□□□□ 0.55
MBD1-207ENST00000398488 GJD2Q9UKL4 321 aa18.47■□□□□ 0.55
MBD1-207ENST00000398488 ZNF536O15090 1300 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 TNPO2O14787 897 aaKnown RBP18.46■□□□□ 0.55
MBD1-207ENST00000398488 IKQ13123 557 aaPredicted RBP18.46■□□□□ 0.55
MBD1-207ENST00000398488 FAM160B2Q86V87 743 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 CPXCR1Q8N123 301 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 MB21D1Q8N884 522 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 CHURC1Q8WUH1 139 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 TMEM87BQ96K49 555 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 SRRDQ9UH36 339 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 MAD2L2Q9UI95 211 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 PTPN22Q9Y2R2 807 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 PTCH2Q9Y6C5 1203 aa18.46■□□□□ 0.55
MBD1-207ENST00000398488 ERICH2A1L162 156 aa18.45■□□□□ 0.54
MBD1-207ENST00000398488 ERCC3P19447 782 aa18.45■□□□□ 0.54
MBD1-207ENST00000398488 SYDE2Q5VT97 1194 aa18.45■□□□□ 0.54
MBD1-207ENST00000398488 GPR142Q7Z601 462 aa18.45■□□□□ 0.54
MBD1-207ENST00000398488 MTA3Q9BTC8 594 aa18.45■□□□□ 0.54
MBD1-207ENST00000398488 BRPF3Q9ULD4 1205 aa18.45■□□□□ 0.54
MBD1-207ENST00000398488 PALM3A6NDB9 673 aaPredicted RBP18.44■□□□□ 0.54
MBD1-207ENST00000398488 RXRAP19793 462 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 CASTP20810 708 aaKnown RBP18.44■□□□□ 0.54
MBD1-207ENST00000398488 STAT3P40763 770 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 LIFRP42702 1097 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 GRM4Q14833 912 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 SART3Q15020 963 aaKnown RBP18.44■□□□□ 0.54
MBD1-207ENST00000398488 CCDC174Q6PII3 467 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 ZNF654Q8IZM8 581 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 AGBL1Q96MI9 1066 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 SMCHD1A6NHR9 2005 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 WDR19Q8NEZ3 1342 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 ZBED4O75132 1171 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
MBD1-207ENST00000398488 RPS6KB1P23443 525 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 SLC4A3P48751 1232 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 FLT3LGP49771 235 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 BLOC1S2Q6QNY1 142 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 PLEKHH3Q7Z736 793 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 RIOX2Q8IUF8 465 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
MBD1-207ENST00000398488 RANBP17Q9H2T7 1088 aaKnown RBP18.44■□□□□ 0.54
MBD1-207ENST00000398488 ZSWIM6Q9HCJ5 1215 aa18.44■□□□□ 0.54
MBD1-207ENST00000398488 MAPK4P31152 587 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 MORN1Q5T089 497 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 WDR78Q5VTH9 848 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 SNRNP48Q6IEG0 339 aaKnown RBP18.43■□□□□ 0.54
MBD1-207ENST00000398488 FBXO46Q6PJ61 603 aaPredicted RBP18.43■□□□□ 0.54
MBD1-207ENST00000398488 Q6ZUG5 572 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 SGMS1Q86VZ5 419 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 NUP133Q8WUM0 1156 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 USP6NLQ92738 828 aa18.43■□□□□ 0.54
MBD1-207ENST00000398488 ATP2A1O14983 1001 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 PTPREP23469 700 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 CCNA1P78396 465 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 ASPRV1Q53RT3 343 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 GPATCH4Q5T3I0 446 aaKnown RBP18.42■□□□□ 0.54
MBD1-207ENST00000398488 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 CATIPQ7Z7H3 387 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 CCDC144CPQ8IYA2 1237 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 ADGRF4Q8IZF3 695 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 SHCBP1Q8NEM2 672 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 COA7Q96BR5 231 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 TEX13BQ9BXU2 312 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 HPS5Q9UPZ3 1129 aa18.42■□□□□ 0.54
MBD1-207ENST00000398488 CENPFP49454 3210 aa18.41■□□□□ 0.54
MBD1-207ENST00000398488 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
MBD1-207ENST00000398488 CYTH3O43739 400 aa18.41■□□□□ 0.54
MBD1-207ENST00000398488 GNRH1P01148 92 aa18.41■□□□□ 0.54
MBD1-207ENST00000398488 HMGB1P09429 215 aaKnown RBP18.41■□□□□ 0.54
MBD1-207ENST00000398488 RUFY3Q7L099 469 aa18.41■□□□□ 0.54
MBD1-207ENST00000398488 JMJD4Q9H9V9 463 aa18.41■□□□□ 0.54
MBD1-207ENST00000398488 VAT1LQ9HCJ6 419 aa18.41■□□□□ 0.54
MBD1-207ENST00000398488 CCDC69A6NI79 296 aa18.4■□□□□ 0.54
MBD1-207ENST00000398488 APOBRQ0VD83 1088 aa18.4■□□□□ 0.54
MBD1-207ENST00000398488 ARHGEF6Q15052 776 aa18.4■□□□□ 0.54
MBD1-207ENST00000398488 PKN2Q16513 984 aaKnown RBP18.4■□□□□ 0.54
MBD1-207ENST00000398488 CMTR1Q8N1G2 835 aaKnown RBP18.4■□□□□ 0.54
MBD1-207ENST00000398488 BRF1Q92994 677 aa18.4■□□□□ 0.54
MBD1-207ENST00000398488 LARP6Q9BRS8 491 aaKnown RBP18.4■□□□□ 0.54
MBD1-207ENST00000398488 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
MBD1-207ENST00000398488 COBLO75128 1261 aa18.39■□□□□ 0.54
MBD1-207ENST00000398488 DDAH1O94760 285 aa18.39■□□□□ 0.54
MBD1-207ENST00000398488 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.54
MBD1-207ENST00000398488 ELNP15502 786 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms