RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 PNMA2Q9UL42 364 aa8.41□□□□□ -1.06
RGPD1-201ENST00000398193 MYH4Q9Y623 1939 aa8.41□□□□□ -1.06
RGPD1-201ENST00000398193 GCFC2P16383 781 aaKnown RBP8.41□□□□□ -1.06
RGPD1-201ENST00000398193 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
RGPD1-201ENST00000398193 MARCKSP29966 332 aaPredicted RBP8.41□□□□□ -1.06
RGPD1-201ENST00000398193 CHRNA5P30532 468 aa8.41□□□□□ -1.06
RGPD1-201ENST00000398193 TERF1P54274 439 aa8.41□□□□□ -1.06
RGPD1-201ENST00000398193 PICALMQ13492 652 aa8.41□□□□□ -1.06
RGPD1-201ENST00000398193 BTNL9Q6UXG8 535 aa8.41□□□□□ -1.06
RGPD1-201ENST00000398193 STAG2Q8N3U4 1231 aa8.41□□□□□ -1.06
RGPD1-201ENST00000398193 SPDYE2BA6NHP3 402 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 SPDYE6P0CI01 402 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 AKR1B1P15121 316 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 ADCY7P51828 1080 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 NIM1KQ8IY84 436 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 SMARCE1Q969G3 411 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 CSRNP2Q9H175 543 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 DNAJC25Q9H1X3 360 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 SH2D4AQ9H788 454 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 KCND1Q9NSA2 647 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 NAPAP54920 295 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 MORC3Q14149 939 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 TNIP1Q15025 636 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 CERKLQ49MI3 558 aaPredicted RBP8.4□□□□□ -1.06
RGPD1-201ENST00000398193 SLC44A5Q8NCS7 719 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 GSDMAQ96QA5 445 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 STX8Q9UNK0 236 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 BECN2A8MW95 431 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 GSDMDP57764 484 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 EVX2Q03828 476 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 AP3B2Q13367 1082 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 SAMD3Q8N6K7 520 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 CCSER1Q9C0I3 900 aa8.4□□□□□ -1.06
RGPD1-201ENST00000398193 CYTH3O43739 400 aa8.4□□□□□ -1.07
RGPD1-201ENST00000398193 PTMAP06454 111 aaKnown RBP8.4□□□□□ -1.07
RGPD1-201ENST00000398193 PIK3AP1Q6ZUJ8 805 aa8.4□□□□□ -1.07
RGPD1-201ENST00000398193 HEATR3Q7Z4Q2 680 aa8.4□□□□□ -1.07
RGPD1-201ENST00000398193 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.07
RGPD1-201ENST00000398193 LRRC27Q9C0I9 530 aa8.4□□□□□ -1.07
RGPD1-201ENST00000398193 USP17L5A8MUK1 530 aa8.4□□□□□ -1.07
RGPD1-201ENST00000398193 COBLL1Q53SF7 1204 aa8.4□□□□□ -1.07
RGPD1-201ENST00000398193 C11orf57Q6ZUT1 292 aaPredicted RBP8.4□□□□□ -1.07
RGPD1-201ENST00000398193 IQUBQ8NA54 791 aa8.4□□□□□ -1.07
RGPD1-201ENST00000398193 YDJCA8MPS7 323 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 ZBTB5O15062 677 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 GTPBP6O43824 516 aaPredicted RBP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 DTNBO60941 627 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 DPEP1P16444 411 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 CLK2P49760 499 aaKnown RBP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 ZNF280AP59817 542 aaPredicted RBP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 DALRD3Q5D0E6 543 aaKnown RBP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 RBM26Q5T8P6 1007 aaKnown RBP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 PPP4R3AQ6IN85 833 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 TNNI2P48788 182 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 SCNN1DP51172 638 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 CNNM4Q6P4Q7 775 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 NEK8Q86SG6 692 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 GOPCQ9HD26 462 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 E2F4Q16254 413 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 SLC35G1Q2M3R5 365 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 CUL5Q93034 780 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 SMCO2A6NFE2 343 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 FXR2P51116 673 aaKnown RBP eCLIP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 FOXR2Q6PJQ5 311 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 ARHGEF10LQ9HCE6 1279 aa8.39□□□□□ -1.07
RGPD1-201ENST00000398193 ZNF70Q9UC06 446 aaPredicted RBP8.39□□□□□ -1.07
RGPD1-201ENST00000398193 UBE2Q2LH0YL09 131 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 KCNJ6P48051 423 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 MRPL12P52815 198 aaKnown RBP8.38□□□□□ -1.07
RGPD1-201ENST00000398193 MYL5Q02045 173 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 DPYDQ12882 1025 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 ABCB5Q2M3G0 1257 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 LONRF3Q496Y0 759 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 DTHD1Q6ZMT9 781 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 ENOX1Q8TC92 643 aaKnown RBP8.38□□□□□ -1.07
RGPD1-201ENST00000398193 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
RGPD1-201ENST00000398193 MAN1B1Q9UKM7 699 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 RBBP6Q7Z6E9 1792 aaKnown RBP8.38□□□□□ -1.07
RGPD1-201ENST00000398193 PTGDRQ13258 359 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 KCNB1Q14721 858 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 LUZP1Q86V48 1076 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 REXO1Q8N1G1 1221 aaKnown RBP8.38□□□□□ -1.07
RGPD1-201ENST00000398193 LARGE2Q8N3Y3 721 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 OGFOD1Q8N543 542 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 CCDC150Q8NCX0 1101 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 CLIC6Q96NY7 704 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 RAB34Q9BZG1 259 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 JMJD4Q9H9V9 463 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 CLIP2Q9UDT6 1046 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 ATF5Q9Y2D1 282 aaPredicted RBP8.38□□□□□ -1.07
RGPD1-201ENST00000398193 CYP3A7-CYP3A51PA0A087WV96 503 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 F8W031 263 aaPredicted RBP8.38□□□□□ -1.07
RGPD1-201ENST00000398193 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 CYP3A7P24462 503 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 PDIA5Q14554 519 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 DLGAP5Q15398 846 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 SH3BP5LQ7L8J4 393 aa8.38□□□□□ -1.07
RGPD1-201ENST00000398193 PAGE5Q96GU1 130 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms