RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ARHGEF12Q9NZN5 1544 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 A6NNZ2 444 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 SUSD5O60279 629 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 KPNA6O60684 536 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 TMCC2O75069 709 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 VAMP4O75379 141 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 LTFP02788 710 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 PYGLP06737 847 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 BPIP17213 487 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 MMP14P50281 582 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 LINC01559Q495D7 138 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 CHST15Q7LFX5 561 aaPredicted RBP7.98□□□□□ -1.13
SMCO1-201ENST00000397537 REC114Q7Z4M0 266 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 ZNF295-AS1Q8N0V1 137 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 OTUD6BQ8N6M0 293 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 SPATA5Q8NB90 893 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 HVCN1Q96D96 273 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 IFT22Q9H7X7 185 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 PRKRIP1Q9H875 184 aaPredicted RBP7.98□□□□□ -1.13
SMCO1-201ENST00000397537 TRIM39Q9HCM9 518 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 ARHGEF4Q9NR80 690 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 LATS2Q9NRM7 1088 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 RAB6BQ9NRW1 208 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMCO1-201ENST00000397537 ODF2LQ9ULJ1 636 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 GIT1Q9Y2X7 761 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 MAGED1Q9Y5V3 778 aaPredicted RBP7.98□□□□□ -1.13
SMCO1-201ENST00000397537 PARP3Q9Y6F1 533 aa7.98□□□□□ -1.13
SMCO1-201ENST00000397537 M0R3H8 397 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 TOR1BO14657 336 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 CNOT4O95628 575 aaKnown RBP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 CD4P01730 458 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 HSD3B1P14060 373 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 RHCEP18577 417 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 PIK3CAP42336 1068 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 TM4SF4P48230 202 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 MPP1Q00013 466 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 RHDQ02161 417 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 PRKG2Q13237 762 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 G3BP1Q13283 466 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 PCBP2Q15366 365 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 GPATCH4Q5T3I0 446 aaKnown RBP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 INTS11Q5TA45 600 aaKnown RBP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 ZNF713Q8N859 430 aaPredicted RBP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 C1orf127Q8N9H9 656 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 NSUN6Q8TEA1 469 aaKnown RBP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 USP7Q93009 1102 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 L3MBTL2Q969R5 705 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 GCC1Q96CN9 775 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 STAC3Q96MF2 364 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 CDC6Q99741 560 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 MENTQ9BUN1 341 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 EFCC1Q9HA90 598 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 ABCB6Q9NP58 842 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 DZANK1Q9NVP4 752 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 ABCF2Q9UG63 623 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 TPCN1Q9ULQ1 816 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 CEP131Q9UPN4 1083 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 DNM3Q9UQ16 869 aa7.97□□□□□ -1.13
SMCO1-201ENST00000397537 TNPO3Q9Y5L0 923 aaKnown RBP7.97□□□□□ -1.13
SMCO1-201ENST00000397537 FAM155AB1AL88 458 aaPredicted RBP7.96□□□□□ -1.13
SMCO1-201ENST00000397537 ARHGAP33O14559 1287 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 ENC1O14682 589 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 GFPT2O94808 682 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 MT-CO1P00395 513 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 CCND1P24385 295 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 GRK6P43250 576 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 RAD52P43351 418 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 ODF1Q14990 250 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 TMEM240Q5SV17 173 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 SPOCD1Q6ZMY3 1216 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 RPAINQ86UA6 219 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 ISCA1Q9BUE6 129 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 ANTXR1Q9H6X2 564 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 PDLIM7Q9NR12 457 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 PCDHB5Q9Y5E4 795 aa7.96□□□□□ -1.13
SMCO1-201ENST00000397537 SETD1AO15047 1707 aaKnown RBP7.96□□□□□ -1.13
SMCO1-201ENST00000397537 A0A1W2PP55 124 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 IQCA1LA6NCM1 817 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 DDX3YO15523 660 aaKnown RBP7.96□□□□□ -1.14
SMCO1-201ENST00000397537 IQGAP2Q13576 1575 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 VPS53Q5VIR6 699 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 B3GNT9Q6UX72 402 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 FAM43AQ8N2R8 423 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 ZNF511Q8NB15 262 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 KCT2Q8NC54 265 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 ACRBPQ8NEB7 543 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 FMNL2Q96PY5 1086 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 TMCC3Q9ULS5 477 aa7.96□□□□□ -1.14
SMCO1-201ENST00000397537 TRBV23-1A0A0A0MS06 115 aa7.95□□□□□ -1.14
SMCO1-201ENST00000397537 FAM170AA1A519 330 aa7.95□□□□□ -1.14
SMCO1-201ENST00000397537 EYA2O00167 538 aa7.95□□□□□ -1.14
SMCO1-201ENST00000397537 HMMRO75330 724 aa7.95□□□□□ -1.14
SMCO1-201ENST00000397537 PAGE1O75459 146 aa7.95□□□□□ -1.14
SMCO1-201ENST00000397537 GNRH1P01148 92 aa7.95□□□□□ -1.14
SMCO1-201ENST00000397537 HNRNPCP07910 306 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMCO1-201ENST00000397537 PYGMP11217 842 aa7.95□□□□□ -1.14
SMCO1-201ENST00000397537 FLT3P36888 993 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms