RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 NUP88Q99567 741 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-203ENST00000397428 SLF1Q9BQI6 1058 aa14.3□□□□□ -0.12
SYNE4-203ENST00000397428 COL25A1Q9BXS0 654 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-203ENST00000397428 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
SYNE4-203ENST00000397428 PLXNA1Q9UIW2 1896 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 MYH7P12883 1935 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 A0A1W2PQ45 241 aaPredicted RBP14.29□□□□□ -0.12
SYNE4-203ENST00000397428 A0A1W2PQY0 241 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 CLTBP09497 229 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 ACLYP53396 1101 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 EPHB4P54760 987 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 FAAP100Q0VG06 881 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
SYNE4-203ENST00000397428 KBTBD3Q8NAB2 608 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 CLIP2Q9UDT6 1046 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 RCAN3Q9UKA8 241 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 FAM184BQ9ULE4 1060 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 CNPY2Q9Y2B0 182 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 ROBO3Q96MS0 1386 aa14.29□□□□□ -0.12
SYNE4-203ENST00000397428 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
SYNE4-203ENST00000397428 MINDY4BA8MYZ0 360 aa14.28□□□□□ -0.12
SYNE4-203ENST00000397428 RNF113AO15541 343 aaKnown RBP14.28□□□□□ -0.12
SYNE4-203ENST00000397428 RAD21O60216 631 aa14.28□□□□□ -0.12
SYNE4-203ENST00000397428 DUSP11O75319 330 aaKnown RBP14.28□□□□□ -0.12
SYNE4-203ENST00000397428 NDUFB10O96000 172 aa14.28□□□□□ -0.12
SYNE4-203ENST00000397428 DDX11Q96FC9 970 aa14.28□□□□□ -0.12
SYNE4-203ENST00000397428 SYNGAP1Q96PV0 1343 aa14.28□□□□□ -0.12
SYNE4-203ENST00000397428 TTYH1Q9H313 450 aaPredicted RBP14.28□□□□□ -0.12
SYNE4-203ENST00000397428 DCTPP1Q9H773 170 aa14.28□□□□□ -0.12
SYNE4-203ENST00000397428 SYNPO2Q9UMS6 1093 aa14.28□□□□□ -0.12
SYNE4-203ENST00000397428 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.13
SYNE4-203ENST00000397428 ZBED4O75132 1171 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 ZFYP08048 801 aaPredicted RBP14.27□□□□□ -0.13
SYNE4-203ENST00000397428 RAG1P15918 1043 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 CDK7P50613 346 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 KCNA10Q16322 511 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 C20orf194Q5TEA3 1177 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 SNRNP48Q6IEG0 339 aaKnown RBP14.27□□□□□ -0.13
SYNE4-203ENST00000397428 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.13
SYNE4-203ENST00000397428 NUP133Q8WUM0 1156 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 APPBP2Q92624 585 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 SLC38A10Q9HBR0 1119 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 TMEM39AQ9NV64 488 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.13
SYNE4-203ENST00000397428 SYNRGQ9UMZ2 1314 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 MOXD2PA6NHM9 499 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 GNAT2P19087 354 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 OAZ1P54368 228 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 NKX3-2P78367 333 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 ACVR2BQ13705 512 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 STK11IPQ8N1F8 1099 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
SYNE4-203ENST00000397428 FGD4Q96M96 766 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 FEM1BQ9UK73 627 aa14.26□□□□□ -0.13
SYNE4-203ENST00000397428 ELP1O95163 1332 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 DCDC2CA8MYV0 355 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 PQBP1O60828 265 aaKnown RBP14.25□□□□□ -0.13
SYNE4-203ENST00000397428 TIMP1P01033 207 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 CST5P28325 142 aaPredicted RBP14.25□□□□□ -0.13
SYNE4-203ENST00000397428 CPXCR1Q8N123 301 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 GMCL1P1Q8NEA9 526 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 CHST13Q8NET6 341 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 NEDD1Q8NHV4 660 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 ABHD16BQ9H3Z7 469 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 ZNF287Q9HBT7 754 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 RAVER2Q9HCJ3 691 aaKnown RBP14.25□□□□□ -0.13
SYNE4-203ENST00000397428 EPB41L4AQ9HCS5 686 aaPredicted RBP14.25□□□□□ -0.13
SYNE4-203ENST00000397428 STARD7Q9NQZ5 370 aa14.25□□□□□ -0.13
SYNE4-203ENST00000397428 TMEM265A0A087WTH1 108 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.24□□□□□ -0.13
SYNE4-203ENST00000397428 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.24□□□□□ -0.13
SYNE4-203ENST00000397428 GPAA1O43292 621 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 ADCY6O43306 1168 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 TTLL1O95922 423 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 FDX1P10109 184 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 GJA9P57773 515 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 FPGSQ05932 587 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 CCDC144BQ3MJ40 725 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 C16orf59Q7L2K0 433 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 MAFAQ8NHW3 353 aaPredicted RBP14.24□□□□□ -0.13
SYNE4-203ENST00000397428 MYLIPQ8WY64 445 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 RNPC3Q96LT9 517 aaKnown RBP14.24□□□□□ -0.13
SYNE4-203ENST00000397428 UPF3AQ9H1J1 476 aaKnown RBP14.24□□□□□ -0.13
SYNE4-203ENST00000397428 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.24□□□□□ -0.13
SYNE4-203ENST00000397428 FBXO40Q9UH90 709 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 TBX21Q9UL17 535 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 EYSQ5T1H1 3165 aa14.24□□□□□ -0.13
SYNE4-203ENST00000397428 MYADML2A6NDP7 307 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 M0R2C6 588 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 CTAGE5O15320 804 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 PRDM1O75626 825 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 SLC4A3P48751 1232 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
SYNE4-203ENST00000397428 MFSD5Q6N075 450 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 ANKRD35Q8N283 1001 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms