RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PLEKHA8P1O95397 391 aa27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 HOXA7P31268 230 aaPredicted RBP27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 SLC16A2P36021 539 aa27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 MAP2K1Q02750 393 aaPredicted RBP27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 TMTC3Q6ZXV5 915 aa27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 FAM160B2Q86V87 743 aa27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 GTF3C6Q969F1 213 aa27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 CPVLQ9H3G5 476 aa27.45■■□□□ 1.98
TSPAN4-203ENST00000397397 CMTR1Q8N1G2 835 aaKnown RBP27.44■■□□□ 1.98
TSPAN4-203ENST00000397397 LZTS2Q9BRK4 669 aa27.44■■□□□ 1.98
TSPAN4-203ENST00000397397 K7ELQ4 463 aaPredicted RBP27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 PDHXO00330 501 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 PLA2G6O60733 806 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 OSBPP22059 807 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 IRX3P78415 501 aaPredicted RBP27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 SYDE2Q5VT97 1194 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 BTNL9Q6UXG8 535 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 CCDC83Q8IWF9 413 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 FAM43AQ8N2R8 423 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 SRBD1Q8N5C6 995 aaKnown RBP27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 KIFC2Q96AC6 838 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 SLF1Q9BQI6 1058 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 SLC45A1Q9Y2W3 748 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 PARP14Q460N5 1801 aa27.43■■□□□ 1.98
TSPAN4-203ENST00000397397 CPLX1O14810 134 aa27.42■■□□□ 1.98
TSPAN4-203ENST00000397397 DHX16O60231 1041 aaKnown RBP27.42■■□□□ 1.98
TSPAN4-203ENST00000397397 TM4SF4P48230 202 aa27.42■■□□□ 1.98
TSPAN4-203ENST00000397397 COG2Q14746 738 aa27.42■■□□□ 1.98
TSPAN4-203ENST00000397397 CCDC82Q8N4S0 544 aa27.42■■□□□ 1.98
TSPAN4-203ENST00000397397 ASCC2Q9H1I8 757 aaPredicted RBP27.42■■□□□ 1.98
TSPAN4-203ENST00000397397 PNMA3Q9UL41 463 aa27.42■■□□□ 1.98
TSPAN4-203ENST00000397397 IGF2BP3O00425 579 aaKnown RBP eCLIP27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 OTUD7BQ6GQQ9 843 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 CPLX2Q6PUV4 134 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 NBPF11Q86T75 865 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 IFNL1Q8IU54 200 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 REM2Q8IYK8 340 aaPredicted RBP27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 PRPF38AQ8NAV1 312 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 VAT1LQ9HCJ6 419 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 PPP1R9AQ9ULJ8 1098 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 PRR12Q9ULL5 1215 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 RLFQ13129 1914 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 DSG3P32926 999 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 ST3GAL1Q11201 340 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 ADGRF4Q8IZF3 695 aa27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 RBM19Q9Y4C8 960 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-203ENST00000397397 SMARCA1P28370 1054 aa27.4■■□□□ 1.98
TSPAN4-203ENST00000397397 SLC35G1Q2M3R5 365 aa27.4■■□□□ 1.98
TSPAN4-203ENST00000397397 P2RX7Q99572 595 aaKnown RBP27.4■■□□□ 1.98
TSPAN4-203ENST00000397397 SPZ1Q9BXG8 430 aa27.4■■□□□ 1.98
TSPAN4-203ENST00000397397 HOXC10Q9NYD6 342 aa27.4■■□□□ 1.98
TSPAN4-203ENST00000397397 CYTH3O43739 400 aa27.39■■□□□ 1.97
TSPAN4-203ENST00000397397 ANP32AP39687 249 aaKnown RBP27.39■■□□□ 1.97
TSPAN4-203ENST00000397397 NTRK3Q16288 839 aa27.39■■□□□ 1.97
TSPAN4-203ENST00000397397 ATG4CQ96DT6 458 aa27.39■■□□□ 1.97
TSPAN4-203ENST00000397397 RIOX1Q9H6W3 641 aa27.39■■□□□ 1.97
TSPAN4-203ENST00000397397 ZCCHC17Q9NP64 241 aaKnown RBP27.39■■□□□ 1.97
TSPAN4-203ENST00000397397 MYPNQ86TC9 1320 aa27.39■■□□□ 1.97
TSPAN4-203ENST00000397397 SPDYE16A6NNV3 312 aaPredicted RBP27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 CDKL5O76039 1030 aa27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 IFNAR1P17181 557 aa27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 FUT2Q10981 343 aa27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 BECN1Q14457 450 aa27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 COL13A1Q5TAT6 717 aaPredicted RBP27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 CNTNAP5Q8WYK1 1306 aa27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 JMJD4Q9H9V9 463 aa27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 BAZ2BQ9UIF8 2168 aaKnown RBP27.38■■□□□ 1.97
TSPAN4-203ENST00000397397 CYP2C8P10632 490 aa27.37■■□□□ 1.97
TSPAN4-203ENST00000397397 SNAP25P60880 206 aa27.37■■□□□ 1.97
TSPAN4-203ENST00000397397 HERVK_113P62684 666 aa27.37■■□□□ 1.97
TSPAN4-203ENST00000397397 PIBF1Q8WXW3 757 aa27.37■■□□□ 1.97
TSPAN4-203ENST00000397397 PHKBQ93100 1093 aa27.37■■□□□ 1.97
TSPAN4-203ENST00000397397 PARK7Q99497 189 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-203ENST00000397397 PPFIA3O75145 1194 aa27.36■■□□□ 1.97
TSPAN4-203ENST00000397397 CTDNEP1O95476 244 aa27.36■■□□□ 1.97
TSPAN4-203ENST00000397397 HSPA8P11142 646 aaKnown RBP27.36■■□□□ 1.97
TSPAN4-203ENST00000397397 CTCFP49711 727 aaPredicted RBP27.36■■□□□ 1.97
TSPAN4-203ENST00000397397 SLC26A6Q9BXS9 759 aa27.36■■□□□ 1.97
TSPAN4-203ENST00000397397 CTDP1Q9Y5B0 961 aaPredicted RBP27.36■■□□□ 1.97
TSPAN4-203ENST00000397397 DTNBO60941 627 aa27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 ZBED4O75132 1171 aa27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 SSRP1Q08945 709 aaKnown RBP27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 CUL4AQ13619 759 aa27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 TAF1CQ15572 869 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 HOMER1Q86YM7 354 aa27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 NSUN7Q8NE18 718 aaKnown RBP27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 SMCR8Q8TEV9 937 aaPredicted RBP27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 RRP36Q96EU6 259 aaKnown RBP27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 PIGSQ96S52 555 aa27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 TSKSQ9UJT2 592 aa27.35■■□□□ 1.97
TSPAN4-203ENST00000397397 hCG_1642624A0A1W2PR95 340 aa27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 VWA5AO00534 786 aa27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 FDX1P10109 184 aa27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 AKAP17AQ02040 695 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 CDC37Q16543 378 aaPredicted RBP27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 TRIM22Q8IYM9 498 aa27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 LLPHQ9BRT6 129 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 BEGAINQ9BUH8 593 aa27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 RANBP17Q9H2T7 1088 aaKnown RBP27.34■■□□□ 1.97
TSPAN4-203ENST00000397397 ADAMTS5Q9UNA0 930 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms